| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF2193 | | FIG01200701: possible membrane protein | 1.0 | GFF2133 | | RNase E specificity factor CsrD | 0.93 | 1 |
| Escherichia coli ECRC62 | 0.79 | BNILDI_12480 | ypfG | Uncharacterized protein YpfG | 0.86 | BNILDI_02015 | csrD | RNase E specificity factor CsrD | low | > 75 |
| Escherichia coli Nissle 1917 | 0.79 | ECOLIN_RS14070 | | DUF1176 domain-containing protein | 0.86 | ECOLIN_RS18635 | | RNase E specificity factor CsrD | low | > 55 |
| Escherichia coli BW25113 | 0.79 | b2466 | ypfG | hypothetical protein (NCBI) | 0.86 | b3252 | yhdA | conserved inner membrane protein (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.79 | OHPLBJKB_01265 | | hypothetical protein | 0.86 | OHPLBJKB_00453 | | RNase E specificity factor CsrD | low | > 73 |
| Escherichia coli BL21 | 0.79 | ECD_02357 | | DUF1176 family protein | 0.86 | ECD_03111 | | targeting factor for csrBC sRNA degradation | low | > 61 |
| Escherichia coli ECOR27 | 0.78 | NOLOHH_13670 | ypfG | Uncharacterized protein YpfG | 0.86 | NOLOHH_09505 | csrD | RNase E specificity factor CsrD | low | > 75 |
| Escherichia coli ECRC98 | 0.78 | JDDGAC_25935 | ypfG | Uncharacterized protein YpfG | 0.86 | JDDGAC_21345 | csrD | RNase E specificity factor CsrD | low | > 86 |
| Escherichia coli ECRC102 | 0.78 | NIAGMN_19760 | ypfG | Uncharacterized protein YpfG | 0.86 | NIAGMN_15480 | csrD | RNase E specificity factor CsrD | — | — |
| Escherichia coli ECRC99 | 0.78 | KEDOAH_06230 | ypfG | Uncharacterized protein YpfG | 0.86 | KEDOAH_10430 | csrD | RNase E specificity factor CsrD | — | — |
| Escherichia coli ECRC100 | 0.78 | OKFHMN_21990 | ypfG | Uncharacterized protein YpfG | 0.86 | OKFHMN_17720 | csrD | RNase E specificity factor CsrD | low | > 80 |
| Escherichia coli ECRC101 | 0.78 | MCAODC_12520 | ypfG | Uncharacterized protein YpfG | 0.86 | MCAODC_08240 | csrD | RNase E specificity factor CsrD | low | > 87 |
| Escherichia fergusonii Becca | 0.78 | EFB2_01422 | | hypothetical protein | 0.86 | EFB2_00579 | | RNase E specificity factor CsrD | low | > 86 |
| Enterobacter sp. TBS_079 | 0.74 | MPMX20_03327 | | hypothetical protein | 0.80 | MPMX20_04158 | | RNase E specificity factor CsrD | low | > 85 |
| Enterobacter asburiae PDN3 | 0.73 | EX28DRAFT_0195 | | Protein of unknown function (DUF1176) | 0.80 | EX28DRAFT_3302 | | diguanylate cyclase (GGDEF) domain | low | > 76 |
| Escherichia coli ECOR38 | 0.67 | HEPCGN_21160 | ypfG | Uncharacterized protein YpfG | 0.86 | HEPCGN_16585 | csrD | RNase E specificity factor CsrD | low | > 87 |
| Klebsiella michiganensis M5al | 0.64 | BWI76_RS20840 | | hypothetical protein | 0.78 | BWI76_RS25505 | | RNase E specificity factor CsrD | low | > 92 |
| Erwinia tracheiphila SCR3 | 0.41 | LU632_RS06735 | | DUF1176 domain-containing protein | 0.51 | LU632_RS21455 | csrD | RNase E specificity factor CsrD | low | > 74 |
| Pantoea sp. MT58 | 0.41 | IAI47_05340 | | DUF1176 domain-containing protein | 0.50 | IAI47_02430 | | RNase E specificity factor CsrD | low | > 76 |
| Rahnella sp. WP5 | 0.37 | EX31_RS22825 | | DUF1176 domain-containing protein | 0.49 | EX31_RS12230 | | RNase E specificity factor CsrD | low | > 89 |
| Dickeya dadantii 3937 | 0.18 | DDA3937_RS01115 | | DUF1176 domain-containing protein | 0.51 | DDA3937_RS01425 | | RNase E specificity factor CsrD | low | > 74 |
| Dickeya dianthicola ME23 | 0.17 | DZA65_RS01170 | | DUF1176 domain-containing protein | 0.51 | DZA65_RS01405 | | RNase E specificity factor CsrD | low | > 75 |
| Dickeya dianthicola 67-19 | 0.17 | HGI48_RS01100 | | DUF1176 domain-containing protein | 0.51 | HGI48_RS01345 | | RNase E specificity factor CsrD | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.09 | HER17_RS17790 | | DUF1176 domain-containing protein | 0.52 | HER17_RS20175 | | RNase E specificity factor CsrD | low | > 75 |