Conservation of cofitness between GFF3257 and GFF1058 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3257 hemimethylated DNA binding protein YccV 1.0 GFF1058 NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) 0.69 11
Escherichia fergusonii Becca 0.93 EFB2_03105 Heat shock protein HspQ 0.95 EFB2_04056 Trifunctional NAD biosynthesis/regulator protein NadR low > 86
Escherichia coli ECRC102 0.93 NIAGMN_02910 hspQ heat shock protein HspQ 0.95 NIAGMN_09040 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR — —
Escherichia coli ECRC101 0.93 OKFHMN_05190 hspQ heat shock protein HspQ 0.95 OKFHMN_11190 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_02700 Heat shock protein HspQ 0.95 OHPLBJKB_03671 Trifunctional NAD biosynthesis/regulator protein NadR low > 73
Escherichia coli BW25113 0.93 b0966 hspQ DNA-binding protein, hemimethylated (RefSeq) 0.95 b4390 nadR probable nadAB transcriptional regulator (VIMSS) low > 76
Escherichia coli BL21 0.93 ECD_00970 heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein 0.95 ECD_04266 trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor low > 60
Escherichia coli ECRC62 0.93 BNILDI_19910 hspQ heat shock protein HspQ 0.95 BNILDI_08080 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR — —
Escherichia coli Nissle 1917 0.93 ECOLIN_RS05080 heat shock protein HspQ 0.95 ECOLIN_RS25195 multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR low > 52
Escherichia coli ECRC99 0.93 KEDOAH_22545 hspQ heat shock protein HspQ 0.95 KEDOAH_16965 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR — —
Escherichia coli ECOR38 0.93 HEPCGN_23330 hspQ heat shock protein HspQ 0.95 HEPCGN_09190 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR low > 85
Escherichia coli ECRC98 0.93 JDDGAC_08800 hspQ heat shock protein HspQ 0.95 JDDGAC_14785 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR — —
Escherichia coli ECOR27 0.93 NOLOHH_21745 hspQ heat shock protein HspQ 0.95 NOLOHH_03515 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR low > 57
Escherichia coli ECRC101 0.93 MCAODC_24580 hspQ heat shock protein HspQ 0.95 MCAODC_01705 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR — —
Enterobacter sp. TBS_079 0.93 MPMX20_01616 Heat shock protein HspQ 0.94 MPMX20_00695 Trifunctional NAD biosynthesis/regulator protein NadR low > 85
Enterobacter asburiae PDN3 0.92 EX28DRAFT_1977 hemimethylated DNA binding domain 0.95 EX28DRAFT_3598 nicotinamide-nucleotide adenylyltransferase, NadR type low > 76
Klebsiella michiganensis M5al 0.89 BWI76_RS10040 heat-shock protein HspQ 0.94 BWI76_RS04170 trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator NadR low > 92
Serratia liquefaciens MT49 0.82 IAI46_08920 heat shock protein HspQ 0.86 IAI46_02950 multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR low > 86
Rahnella sp. WP5 0.72 EX31_RS17995 heat shock protein HspQ 0.89 EX31_RS04025 multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR low > 89
Pantoea sp. MT58 0.71 IAI47_12600 heat shock protein HspQ 0.88 IAI47_16340 multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR low > 76
Dickeya dianthicola 67-19 0.64 HGI48_RS15275 heat shock protein HspQ 0.88 HGI48_RS02375 multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR low > 71
Dickeya dadantii 3937 0.64 DDA3937_RS15200 heat shock protein HspQ 0.88 DDA3937_RS02415 multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR low > 74
Dickeya dianthicola ME23 0.64 DZA65_RS16100 heat shock protein HspQ 0.88 DZA65_RS02480 multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR low > 75
Pectobacterium carotovorum WPP14 0.61 HER17_RS08465 heat shock protein HspQ 0.87 HER17_RS19090 multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR low > 75

Not shown: 1 genomes with orthologs for GFF3257 only; 3 genomes with orthologs for GFF1058 only