Conservation of cofitness between ECD_03243 and ECD_04259 in Escherichia coli BL21

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03243 DNA catabolic putative fimbrial transporter 1.0 ECD_04259 phosphopentomutase 0.71 10
Escherichia coli BW25113 1.00 b3391 hofQ predicted fimbrial transporter (NCBI) 1.00 b4383 deoB phosphopentomutase (NCBI) low > 76
Escherichia coli Nissle 1917 0.98 ECOLIN_RS19370 DNA uptake porin HofQ 1.00 ECOLIN_RS25160 phosphopentomutase low > 55
Escherichia coli ECOR27 0.98 NOLOHH_08895 hofQ DNA uptake porin HofQ 1.00 NOLOHH_03550 deoB phosphopentomutase low > 75
Escherichia coli ECRC62 0.97 BNILDI_02625 hofQ DNA uptake porin HofQ 1.00 BNILDI_08045 deoB phosphopentomutase low > 75
Escherichia coli ECRC101 0.97 MCAODC_07635 hofQ DNA uptake porin HofQ 1.00 MCAODC_01735 deoB phosphopentomutase low > 87
Escherichia coli ECRC102 0.97 NIAGMN_14875 hofQ DNA uptake porin HofQ 1.00 NIAGMN_09070 deoB phosphopentomutase — —
Escherichia coli ECRC100 0.97 OKFHMN_17105 hofQ DNA uptake porin HofQ 1.00 OKFHMN_11220 deoB phosphopentomutase low > 80
Escherichia coli ECRC99 0.97 KEDOAH_11035 hofQ DNA uptake porin HofQ 1.00 KEDOAH_16930 deoB phosphopentomutase — —
Escherichia coli ECRC98 0.97 JDDGAC_20735 hofQ DNA uptake porin HofQ 1.00 JDDGAC_14815 deoB phosphopentomutase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_00312 Type IV pilus biogenesis and competence protein PilQ 1.00 OHPLBJKB_03678 Phosphopentomutase low > 73
Escherichia coli ECOR38 0.96 HEPCGN_15925 hofQ DNA uptake porin HofQ 1.00 HEPCGN_09225 deoB phosphopentomutase low > 87
Escherichia fergusonii Becca 0.95 EFB2_00437 Type IV pilus biogenesis and competence protein PilQ 1.00 EFB2_04063 Phosphopentomutase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF628 Type IV pilus biogenesis protein PilQ 0.94 GFF1045 Phosphopentomutase (EC 5.4.2.7) low > 78
Enterobacter asburiae PDN3 0.73 EX28DRAFT_4151 type IV pilus secretin (or competence protein) PilQ 0.95 EX28DRAFT_3592 phosphopentomutase low > 76
Enterobacter sp. TBS_079 0.72 MPMX20_04280 Type IV pilus biogenesis and competence protein PilQ 0.95 MPMX20_00682 Phosphopentomutase low > 85
Klebsiella michiganensis M5al 0.67 BWI76_RS26100 DNA transporter HofQ 0.94 BWI76_RS04140 phosphopentomutase low > 92
Pectobacterium carotovorum WPP14 0.49 HER17_RS01770 DNA uptake porin HofQ 0.84 HER17_RS18125 phosphopentomutase low > 75
Pantoea sp. MT58 0.49 IAI47_01885 DNA uptake porin HofQ 0.84 IAI47_03410 phosphopentomutase low > 76
Erwinia tracheiphila SCR3 0.49 LU632_RS22875 hofQ DNA uptake porin HofQ 0.84 LU632_RS02525 deoB phosphopentomutase 0.49 20
Dickeya dianthicola ME23 0.48 DZA65_RS20770 DNA uptake porin HofQ 0.83 DZA65_RS03315 phosphopentomutase low > 75
Dickeya dianthicola 67-19 0.48 HGI48_RS19685 DNA uptake porin HofQ 0.83 HGI48_RS03320 phosphopentomutase — —
Dickeya dadantii 3937 0.48 DDA3937_RS19555 DNA uptake porin HofQ 0.83 DDA3937_RS03145 phosphopentomutase — —
Rahnella sp. WP5 0.47 EX31_RS04730 DNA uptake porin HofQ 0.88 EX31_RS04055 phosphopentomutase low > 89
Serratia liquefaciens MT49 0.46 IAI46_23715 DNA uptake porin HofQ 0.87 IAI46_02920 phosphopentomutase low > 86

Not shown: 5 genomes with orthologs for ECD_03243 only; 14 genomes with orthologs for ECD_04259 only