Conservation of cofitness between ECD_03636 and ECD_04029 in Escherichia coli BL21

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03636 D-ribose ABC transporter permease 1.0 ECD_04029 mechanosensitive channel protein, miniconductance 0.48 5
Escherichia coli ECRC100 1.00 OKFHMN_14740 rbsC ribose ABC transporter permease 1.00 OKFHMN_12330 mscM miniconductance mechanosensitive channel MscM low > 80
Escherichia coli ECOR27 1.00 NOLOHH_06875 rbsC ribose ABC transporter permease 1.00 NOLOHH_04590 mscM miniconductance mechanosensitive channel MscM low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21560 ribose ABC transporter permease 1.00 ECOLIN_RS24165 miniconductance mechanosensitive channel MscM low > 55
Escherichia coli ECRC62 1.00 BNILDI_04650 rbsC ribose ABC transporter permease 1.00 BNILDI_06900 mscM miniconductance mechanosensitive channel MscM low > 75
Escherichia coli ECRC99 1.00 KEDOAH_13410 rbsC ribose ABC transporter permease 1.00 KEDOAH_15835 mscM miniconductance mechanosensitive channel MscM — —
Escherichia coli ECRC101 1.00 MCAODC_05245 rbsC ribose ABC transporter permease 1.00 MCAODC_02840 mscM miniconductance mechanosensitive channel MscM low > 87
Escherichia coli ECRC98 1.00 JDDGAC_18360 rbsC ribose ABC transporter permease 1.00 JDDGAC_15965 mscM miniconductance mechanosensitive channel MscM low > 86
Escherichia fergusonii Becca 1.00 EFB2_04883 Ribose import permease protein RbsC 0.99 EFB2_04376 Miniconductance mechanosensitive channel MscM low > 86
Escherichia coli BW25113 1.00 b3750 rbsC ribose ABC transporter permease protein (NCBI) 1.00 b4159 yjeP predicted mechanosensitive channel (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04303 Ribose import permease protein RbsC 1.00 OHPLBJKB_03883 Miniconductance mechanosensitive channel MscM low > 73
Escherichia coli ECRC102 1.00 NIAGMN_12495 rbsC ribose ABC transporter permease 1.00 NIAGMN_10175 mscM miniconductance mechanosensitive channel MscM — —
Escherichia coli ECOR38 1.00 HEPCGN_13450 rbsC ribose ABC transporter permease 1.00 HEPCGN_10555 mscM miniconductance mechanosensitive channel MscM low > 87
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4026 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 0.89 EX28DRAFT_3357 Small-conductance mechanosensitive channel low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_04617 Ribose import permease protein RbsC 0.89 MPMX20_00440 Miniconductance mechanosensitive channel MscM low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF1707 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) 0.88 GFF1992 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS00280 ribose ABC transporter permease 0.88 BWI76_RS02465 miniconductance mechanosensitive channel MscM low > 92
Pectobacterium carotovorum WPP14 0.90 HER17_RS21540 ribose ABC transporter permease 0.67 HER17_RS02400 miniconductance mechanosensitive channel MscM low > 75
Dickeya dadantii 3937 0.87 DDA3937_RS00040 ribose ABC transporter permease 0.64 DDA3937_RS18955 miniconductance mechanosensitive channel MscM low > 74
Dickeya dianthicola ME23 0.87 DZA65_RS22305 ribose ABC transporter permease 0.65 DZA65_RS20165 miniconductance mechanosensitive channel MscM low > 75
Serratia liquefaciens MT49 0.87 IAI46_25065 ribose ABC transporter permease 0.67 IAI46_01560 miniconductance mechanosensitive channel MscM low > 86
Dickeya dianthicola 67-19 0.87 HGI48_RS21325 ribose ABC transporter permease 0.64 HGI48_RS19050 miniconductance mechanosensitive channel MscM low > 71
Rahnella sp. WP5 0.85 EX31_RS06180 ribose ABC transporter permease 0.67 EX31_RS08880 miniconductance mechanosensitive channel MscM low > 89
Pantoea sp. MT58 0.85 IAI47_00360 ribose ABC transporter permease 0.71 IAI47_02525 miniconductance mechanosensitive channel MscM low > 76

Not shown: 35 genomes with orthologs for ECD_03636 only; 5 genomes with orthologs for ECD_04029 only