Conservation of cofitness between ECD_02634 and ECD_04008 in Escherichia coli BL21

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02634 putative D-glucarate transporter 1.0 ECD_04008 C4-dicarboxylate antiporter low > 61
Escherichia coli ECOR27 1.00 NOLOHH_12100 gudP galactarate/glucarate/glycerate transporter GudP 1.00 NOLOHH_04705 dcuA anaerobic C4-dicarboxylate transporter DcuA low > 75
Escherichia coli ECOR38 1.00 HEPCGN_19475 gudP galactarate/glucarate/glycerate transporter GudP 1.00 HEPCGN_10665 dcuA anaerobic C4-dicarboxylate transporter DcuA low > 87
Escherichia coli ECRC62 1.00 BNILDI_10605 gudP galactarate/glucarate/glycerate transporter GudP 1.00 BNILDI_06785 dcuA anaerobic C4-dicarboxylate transporter DcuA 0.57 42
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00942 putative glucarate transporter 1.00 OHPLBJKB_03905 Anaerobic C4-dicarboxylate transporter DcuA low > 73
Escherichia fergusonii Becca 1.00 EFB2_01128 putative glucarate transporter 1.00 EFB2_04397 Anaerobic C4-dicarboxylate transporter DcuA low > 86
Escherichia coli BW25113 1.00 b2789 gudP predicted D-glucarate transporter (NCBI) 1.00 b4138 dcuA C4-dicarboxylate antiporter (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS15540 galactarate/glucarate/glycerate transporter GudP 1.00 ECOLIN_RS24040 anaerobic C4-dicarboxylate transporter DcuA low > 55
Escherichia coli ECRC101 1.00 MCAODC_10745 gudP galactarate/glucarate/glycerate transporter GudP 1.00 MCAODC_02950 dcuA anaerobic C4-dicarboxylate transporter DcuA low > 87
Escherichia coli ECRC100 1.00 OKFHMN_20220 gudP galactarate/glucarate/glycerate transporter GudP 1.00 OKFHMN_12440 dcuA anaerobic C4-dicarboxylate transporter DcuA low > 80
Escherichia coli ECRC98 1.00 JDDGAC_23885 gudP galactarate/glucarate/glycerate transporter GudP 1.00 JDDGAC_16075 dcuA anaerobic C4-dicarboxylate transporter DcuA low > 86
Escherichia coli ECRC102 1.00 NIAGMN_17990 gudP galactarate/glucarate/glycerate transporter GudP 1.00 NIAGMN_10285 dcuA anaerobic C4-dicarboxylate transporter DcuA — —
Escherichia coli ECRC99 1.00 KEDOAH_07910 gudP galactarate/glucarate/glycerate transporter GudP 1.00 KEDOAH_15725 dcuA anaerobic C4-dicarboxylate transporter DcuA — —
Klebsiella michiganensis M5al 0.98 BWI76_RS22835 MFS transporter 0.58 BWI76_RS02325 anaerobic C4-dicarboxylate transporter low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF4843 D-glucarate permease 0.92 GFF2014 C4-dicarboxylate transporter DcuA low > 78
Enterobacter asburiae PDN3 0.94 EX28DRAFT_2870 D-galactonate transporter 0.58 EX28DRAFT_3335 anaerobic c4-dicarboxylate membrane transporter family protein low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_03659 putative glucarate transporter 0.58 MPMX20_00418 Anaerobic C4-dicarboxylate transporter DcuA low > 85
Rahnella sp. WP5 0.87 EX31_RS03160 MFS transporter 0.78 EX31_RS08970 anaerobic C4-dicarboxylate transporter low > 89
Erwinia tracheiphila SCR3 0.85 LU632_RS06310 MFS transporter 0.56 LU632_RS01845 anaerobic C4-dicarboxylate transporter low > 74
Pectobacterium carotovorum WPP14 0.84 HER17_RS04075 MFS transporter 0.57 HER17_RS18840 anaerobic C4-dicarboxylate transporter low > 75
Pantoea sp. MT58 0.83 IAI47_04080 MFS transporter 0.57 IAI47_17325 anaerobic C4-dicarboxylate transporter low > 76
Dickeya dadantii 3937 0.83 DDA3937_RS17055 MFS transporter 0.59 DDA3937_RS02715 anaerobic C4-dicarboxylate transporter low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS17110 MFS transporter 0.59 HGI48_RS02690 anaerobic C4-dicarboxylate transporter low > 71
Dickeya dianthicola ME23 0.82 DZA65_RS18185 MFS transporter 0.59 DZA65_RS02845 anaerobic C4-dicarboxylate transporter low > 75
Serratia liquefaciens MT49 0.35 IAI46_16925 MFS transporter 0.84 IAI46_01475 anaerobic C4-dicarboxylate transporter low > 86

Not shown: 26 genomes with orthologs for ECD_02634 only; 7 genomes with orthologs for ECD_04008 only