Conservation of cofitness between ECD_00806 and ECD_03788 in Escherichia coli BL21

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00806 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a 1.0 ECD_03788 rhamnulose-1-phosphate aldolase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02871 D-alanyl-D-alanine carboxypeptidase DacC 0.98 OHPLBJKB_04148 Rhamnulose-1-phosphate aldolase low > 73
Escherichia coli BW25113 1.00 b0839 dacC D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) (NCBI) 0.98 b3902 rhaD rhamnulose-1-phosphate aldolase (NCBI) low > 76
Escherichia coli ECRC99 1.00 KEDOAH_21870 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.97 KEDOAH_14245 rhaD rhamnulose-1-phosphate aldolase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04460 serine-type D-Ala-D-Ala carboxypeptidase 0.98 ECOLIN_RS22480 rhamnulose-1-phosphate aldolase — —
Escherichia coli ECRC101 1.00 MCAODC_25255 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.97 MCAODC_04410 rhaD rhamnulose-1-phosphate aldolase low > 87
Escherichia coli ECOR27 1.00 NOLOHH_22410 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.99 NOLOHH_06035 rhaD rhamnulose-1-phosphate aldolase low > 75
Escherichia coli ECOR38 1.00 HEPCGN_01990 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.98 HEPCGN_12545 rhaD rhamnulose-1-phosphate aldolase low > 87
Escherichia coli ECRC102 1.00 NIAGMN_04085 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.97 NIAGMN_11665 rhaD rhamnulose-1-phosphate aldolase — —
Escherichia coli ECRC62 1.00 BNILDI_20670 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.99 BNILDI_05490 rhaD rhamnulose-1-phosphate aldolase low > 75
Escherichia coli ECRC100 1.00 OKFHMN_06040 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.97 OKFHMN_13910 rhaD rhamnulose-1-phosphate aldolase low > 80
Escherichia coli ECRC98 1.00 JDDGAC_09675 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.97 JDDGAC_17535 rhaD rhamnulose-1-phosphate aldolase low > 86
Escherichia fergusonii Becca 1.00 EFB2_03267 D-alanyl-D-alanine carboxypeptidase DacC 0.98 EFB2_04715 Rhamnulose-1-phosphate aldolase 0.39 9
Enterobacter sp. TBS_079 0.90 MPMX20_01477 D-alanyl-D-alanine carboxypeptidase DacC 0.88 MPMX20_04565 Rhamnulose-1-phosphate aldolase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF744 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.93 GFF2263 Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) low > 78
Klebsiella michiganensis M5al 0.85 BWI76_RS09145 serine-type D-Ala-D-Ala carboxypeptidase 0.89 BWI76_RS00670 Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) (from data) low > 92
Pantoea sp. MT58 0.75 IAI47_13090 serine hydrolase 0.67 IAI47_09710 rhamnulose-1-phosphate aldolase low > 76
Pectobacterium carotovorum WPP14 0.72 HER17_RS12545 serine hydrolase 0.76 HER17_RS19260 rhamnulose-1-phosphate aldolase low > 75
Dickeya dadantii 3937 0.68 DDA3937_RS09420 serine hydrolase 0.72 DDA3937_RS02310 rhamnulose-1-phosphate aldolase low > 74
Dickeya dianthicola 67-19 0.68 HGI48_RS09435 serine hydrolase 0.22 HGI48_RS01755 rhamnulose-1-phosphate aldolase low > 71
Dickeya dianthicola ME23 0.67 DZA65_RS09745 D-alanyl-D-alanine carboxypeptidase 0.22 DZA65_RS01830 rhamnulose-1-phosphate aldolase low > 75
Rahnella sp. WP5 0.65 EX31_RS09695 D-alanyl-D-alanine carboxypeptidase 0.70 EX31_RS04185 rhamnulose-1-phosphate aldolase low > 89

Not shown: 52 genomes with orthologs for ECD_00806 only; 7 genomes with orthologs for ECD_03788 only