Conservation of cofitness between ECD_04254 and ECD_03373 in Escherichia coli BL21

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_04254 putative DNase 1.0 ECD_03373 cyclic-di-GMP phosphodiesterase, FlhDC-regulated 0.57 1
Escherichia coli BW25113 1.00 b4378 yjjV predicted DNase (NCBI) 1.00 b3525 yhjH orf, hypothetical protein (VIMSS) low > 76
Escherichia fergusonii Becca 0.96 EFB2_04068 putative metal-dependent hydrolase YjjV 0.99 EFB2_00283 Cyclic di-GMP phosphodiesterase PdeH low > 86
Escherichia coli ECOR38 0.96 HEPCGN_09265 tatD metal-dependent hydrolase 0.99 HEPCGN_15115 pdeH cyclic-guanylate-specific phosphodiesterase low > 87
Escherichia coli ECRC62 0.96 BNILDI_08020 tatD metal-dependent hydrolase 1.00 BNILDI_03380 pdeH cyclic-guanylate-specific phosphodiesterase 0.55 52
Escherichia coli Nissle 1917 0.95 ECOLIN_RS25130 metal-dependent hydrolase 1.00 ECOLIN_RS20160 cyclic-guanylate-specific phosphodiesterase low > 55
Escherichia coli ECOR27 0.94 NOLOHH_03580 yjjV metal-dependent hydrolase 1.00 NOLOHH_08175 pdeH cyclic-guanylate-specific phosphodiesterase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.94 OHPLBJKB_03683 putative metal-dependent hydrolase YjjV 1.00 OHPLBJKB_00177 Cyclic di-GMP phosphodiesterase PdeH low > 73
Escherichia coli ECRC98 0.93 JDDGAC_14855 yjjV metal-dependent hydrolase 1.00 JDDGAC_19840 pdeH cyclic-guanylate-specific phosphodiesterase low > 86
Escherichia coli ECRC99 0.93 KEDOAH_16885 yjjV metal-dependent hydrolase 1.00 KEDOAH_11940 pdeH cyclic-guanylate-specific phosphodiesterase
Escherichia coli ECRC100 0.93 OKFHMN_11260 yjjV metal-dependent hydrolase 1.00 OKFHMN_16210 pdeH cyclic-guanylate-specific phosphodiesterase low > 80
Escherichia coli ECRC101 0.93 MCAODC_01775 yjjV metal-dependent hydrolase 1.00 MCAODC_06725 pdeH cyclic-guanylate-specific phosphodiesterase low > 87
Escherichia coli ECRC102 0.93 NIAGMN_09110 yjjV metal-dependent hydrolase 1.00 NIAGMN_13975 pdeH cyclic-guanylate-specific phosphodiesterase
Klebsiella michiganensis M5al 0.76 BWI76_RS04120 metal-dependent hydrolase 0.18 BWI76_RS23480 EAL domain-containing protein low > 92
Enterobacter asburiae PDN3 0.73 EX28DRAFT_3587 Mg-dependent DNase 0.75 EX28DRAFT_4052 FOG: EAL domain
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF1040 Putative deoxyribonuclease YjjV 0.81 GFF499 GGDEF/EAL domain protein YhjH low > 78
Enterobacter sp. TBS_079 0.72 MPMX20_00677 putative metal-dependent hydrolase YjjV 0.76 MPMX20_04410 Cyclic di-GMP phosphodiesterase PdeH low > 85
Pantoea sp. MT58 0.65 IAI47_03395 metal-dependent hydrolase 0.54 IAI47_18560 cyclic-guanylate-specific phosphodiesterase low > 76
Serratia liquefaciens MT49 0.64 IAI46_02900 TatD family hydrolase 0.43 IAI46_24310 cyclic-guanylate-specific phosphodiesterase low > 86
Pectobacterium carotovorum WPP14 0.61 HER17_RS19045 TatD family hydrolase 0.45 HER17_RS05845 cyclic-guanylate-specific phosphodiesterase low > 75
Dickeya dianthicola ME23 0.58 DZA65_RS02520 metal-dependent hydrolase 0.42 DZA65_RS16870 cyclic-guanylate-specific phosphodiesterase low > 75
Dickeya dianthicola 67-19 0.58 HGI48_RS02415 TatD family hydrolase 0.42 HGI48_RS15790 cyclic-guanylate-specific phosphodiesterase low > 71
Dickeya dadantii 3937 0.57 DDA3937_RS02460 TatD family hydrolase 0.47 DDA3937_RS15705 cyclic-guanylate-specific phosphodiesterase low > 74
Rahnella sp. WP5 0.56 EX31_RS04070 deoxyribonuclease YjjV 0.44 EX31_RS05425 cyclic-guanylate-specific phosphodiesterase low > 89

Not shown: 52 genomes with orthologs for ECD_04254 only; 0 genomes with orthologs for ECD_03373 only