Conservation of cofitness between ECD_00067 and ECD_03118 in Escherichia coli BL21

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00067 DedA family inner membrane protein 1.0 ECD_03118 tRNA-dihydrouridine synthase B 0.80 1
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03593 Inner membrane protein YabI 0.89 OHPLBJKB_00445 putative tRNA-dihydrouridine synthase 0.37 72
Escherichia coli ECOR38 1.00 HEPCGN_08750 yabI Inner membrane protein YabI 1.00 HEPCGN_16505 dusB tRNA dihydrouridine synthase DusB low > 85
Escherichia coli ECRC102 1.00 NIAGMN_08620 yabI Inner membrane protein YabI 1.00 NIAGMN_15445 dusB tRNA dihydrouridine synthase DusB — —
Escherichia coli ECRC101 1.00 OKFHMN_10770 yabI Inner membrane protein YabI 1.00 OKFHMN_17685 dusB tRNA dihydrouridine synthase DusB — —
Escherichia coli ECRC99 1.00 KEDOAH_17385 yabI Inner membrane protein YabI 0.90 KEDOAH_10465 dusB tRNA dihydrouridine synthase DusB — —
Escherichia coli ECRC101 1.00 MCAODC_01285 yabI Inner membrane protein YabI 1.00 MCAODC_08205 dusB tRNA dihydrouridine synthase DusB — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00355 DedA family protein 1.00 ECOLIN_RS18725 tRNA dihydrouridine synthase DusB low > 52
Escherichia coli ECRC98 1.00 JDDGAC_14365 yabI Inner membrane protein YabI 0.90 JDDGAC_21310 dusB tRNA dihydrouridine synthase DusB — —
Escherichia coli BW25113 1.00 b0065 yabI conserved inner membrane protein (NCBI) 1.00 b3260 dusB tRNA-dihydrouridine synthase B (NCBI) low > 76
Escherichia coli ECRC62 0.99 BNILDI_08495 yabI Inner membrane protein YabI 1.00 BNILDI_02050 dusB tRNA dihydrouridine synthase DusB — —
Escherichia coli ECOR27 0.99 NOLOHH_03115 yabI Inner membrane protein YabI 1.00 NOLOHH_09470 dusB tRNA dihydrouridine synthase DusB low > 57
Escherichia fergusonii Becca 0.98 EFB2_03980 Inner membrane protein YabI 1.00 EFB2_00564 tRNA-dihydrouridine synthase B low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF175 DedA family inner membrane protein YabI 0.84 GFF2124 tRNA dihydrouridine synthase B (EC 1.-.-.-) low > 78
Enterobacter asburiae PDN3 0.84 EX28DRAFT_3657 Uncharacterized membrane-associated protein 0.94 EX28DRAFT_3313 putative TIM-barrel protein, nifR3 family low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_00759 Inner membrane protein YabI 0.96 MPMX20_04169 tRNA-dihydrouridine synthase B low > 85
Klebsiella michiganensis M5al 0.78 BWI76_RS04600 inner membrane protein 0.95 BWI76_RS25565 tRNA dihydrouridine synthase DusB — —
Pectobacterium carotovorum WPP14 0.66 HER17_RS03005 DedA family protein 0.89 HER17_RS20235 tRNA dihydrouridine synthase DusB low > 75
Pantoea sp. MT58 0.66 IAI47_16045 DedA family protein 0.86 IAI47_02385 tRNA dihydrouridine synthase DusB low > 76
Serratia liquefaciens MT49 0.65 IAI46_03285 DedA family protein 0.89 IAI46_22775 tRNA dihydrouridine synthase DusB low > 86
Dickeya dadantii 3937 0.62 DDA3937_RS18180 DedA family protein 0.90 DDA3937_RS01375 tRNA dihydrouridine synthase DusB low > 74
Dickeya dianthicola 67-19 0.62 HGI48_RS18130 DedA family protein 0.90 HGI48_RS01295 tRNA dihydrouridine synthase DusB low > 71
Dickeya dianthicola ME23 0.62 DZA65_RS19280 DedA family protein 0.90 DZA65_RS01355 tRNA dihydrouridine synthase DusB low > 75
Rahnella sp. WP5 0.57 EX31_RS03735 DedA family protein 0.88 EX31_RS12180 tRNA dihydrouridine synthase DusB low > 89

Not shown: 1 genomes with orthologs for ECD_00067 only; 72 genomes with orthologs for ECD_03118 only