Conservation of cofitness between ECD_00067 and ECD_03033 in Escherichia coli BL21

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00067 DedA family inner membrane protein 1.0 ECD_03033 tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase 0.76 4
Escherichia coli ECOR38 1.00 HEPCGN_08750 yabI Inner membrane protein YabI 1.00 HEPCGN_17000 truB tRNA pseudouridine(55) synthase TruB low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03593 Inner membrane protein YabI 1.00 OHPLBJKB_00534 tRNA pseudouridine synthase B low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00355 DedA family protein 1.00 ECOLIN_RS18185 tRNA pseudouridine(55) synthase TruB low > 52
Escherichia coli ECRC99 1.00 KEDOAH_17385 yabI Inner membrane protein YabI 1.00 KEDOAH_10025 truB tRNA pseudouridine(55) synthase TruB — —
Escherichia coli ECRC102 1.00 NIAGMN_08620 yabI Inner membrane protein YabI 1.00 NIAGMN_15885 truB tRNA pseudouridine(55) synthase TruB — —
Escherichia coli BW25113 1.00 b0065 yabI conserved inner membrane protein (NCBI) 1.00 b3166 truB tRNA pseudouridine synthase B (NCBI) low > 76
Escherichia coli ECRC101 1.00 MCAODC_01285 yabI Inner membrane protein YabI 1.00 MCAODC_08645 truB tRNA pseudouridine(55) synthase TruB — —
Escherichia coli ECRC98 1.00 JDDGAC_14365 yabI Inner membrane protein YabI 1.00 JDDGAC_21750 truB tRNA pseudouridine(55) synthase TruB — —
Escherichia coli ECRC101 1.00 OKFHMN_10770 yabI Inner membrane protein YabI 1.00 OKFHMN_18125 truB tRNA pseudouridine(55) synthase TruB — —
Escherichia coli ECRC62 0.99 BNILDI_08495 yabI Inner membrane protein YabI 1.00 BNILDI_01610 truB tRNA pseudouridine(55) synthase TruB — —
Escherichia coli ECOR27 0.99 NOLOHH_03115 yabI Inner membrane protein YabI 1.00 NOLOHH_09925 truB tRNA pseudouridine(55) synthase TruB low > 57
Escherichia fergusonii Becca 0.98 EFB2_03980 Inner membrane protein YabI 1.00 EFB2_00657 tRNA pseudouridine synthase B low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF175 DedA family inner membrane protein YabI 0.95 GFF1500 tRNA pseudouridine synthase B (EC 4.2.1.70) low > 78
Enterobacter asburiae PDN3 0.84 EX28DRAFT_3657 Uncharacterized membrane-associated protein 0.92 EX28DRAFT_3217 tRNA pseudouridine(55) synthase low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_00759 Inner membrane protein YabI 0.91 MPMX20_04071 tRNA pseudouridine synthase B low > 85
Klebsiella michiganensis M5al 0.78 BWI76_RS04600 inner membrane protein 0.91 BWI76_RS25080 tRNA pseudouridine(55) synthase low > 92
Pectobacterium carotovorum WPP14 0.66 HER17_RS03005 DedA family protein 0.78 HER17_RS18200 tRNA pseudouridine(55) synthase TruB low > 75
Pantoea sp. MT58 0.66 IAI47_16045 DedA family protein 0.74 IAI47_17015 tRNA pseudouridine(55) synthase TruB low > 76
Serratia liquefaciens MT49 0.65 IAI46_03285 DedA family protein 0.82 IAI46_01945 tRNA pseudouridine(55) synthase TruB low > 86
Dickeya dadantii 3937 0.62 DDA3937_RS18180 DedA family protein 0.77 DDA3937_RS03080 tRNA pseudouridine(55) synthase TruB low > 74
Dickeya dianthicola ME23 0.62 DZA65_RS19280 DedA family protein 0.75 DZA65_RS03245 tRNA pseudouridine(55) synthase TruB low > 75
Dickeya dianthicola 67-19 0.62 HGI48_RS18130 DedA family protein 0.76 HGI48_RS03250 tRNA pseudouridine(55) synthase TruB low > 71
Erwinia tracheiphila SCR3 0.61 LU632_RS02820 DedA family protein 0.74 LU632_RS21050 truB tRNA pseudouridine(55) synthase TruB low > 74
Rahnella sp. WP5 0.57 EX31_RS03735 DedA family protein 0.75 EX31_RS08530 tRNA pseudouridine(55) synthase TruB low > 89

Not shown: 0 genomes with orthologs for ECD_00067 only; 59 genomes with orthologs for ECD_03033 only