Conservation of cofitness between ECD_02630 and ECD_02880 in Escherichia coli BL21

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02630 23S rRNA m(5)U1939 methyltransferase, SAM-dependent 1.0 ECD_02880 membrane spanning protein in TonB-ExbB-ExbD complex 0.45 59
Escherichia coli BW25113 1.00 b2785 rumA 23S rRNA (uracil-5-)-methyltransferase (NCBI) 1.00 b3006 exbB membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00946 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.99 OHPLBJKB_00694 Biopolymer transport protein ExbB low > 73
Escherichia coli ECRC62 0.99 BNILDI_10625 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.99 BNILDI_00775 exbB tol-pal system-associated acyl-CoA thioesterase low > 75
Escherichia coli ECOR27 0.99 NOLOHH_12120 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.99 NOLOHH_10740 exbB tol-pal system-associated acyl-CoA thioesterase low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS15520 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 1.00 ECOLIN_RS17305 tol-pal system-associated acyl-CoA thioesterase low > 55
Escherichia coli ECRC102 0.99 NIAGMN_18015 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.99 NIAGMN_16730 exbB tol-pal system-associated acyl-CoA thioesterase — —
Escherichia coli ECRC98 0.99 JDDGAC_23910 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.99 JDDGAC_22600 exbB tol-pal system-associated acyl-CoA thioesterase low > 86
Escherichia coli ECRC100 0.99 OKFHMN_20245 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.99 OKFHMN_18965 exbB tol-pal system-associated acyl-CoA thioesterase low > 80
Escherichia coli ECRC101 0.99 MCAODC_10770 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.99 MCAODC_09480 exbB tol-pal system-associated acyl-CoA thioesterase low > 87
Escherichia coli ECRC99 0.99 KEDOAH_07885 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.99 KEDOAH_09180 exbB tol-pal system-associated acyl-CoA thioesterase — —
Escherichia fergusonii Becca 0.98 EFB2_01132 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 1.00 EFB2_00803 Biopolymer transport protein ExbB low > 86
Escherichia coli ECOR38 0.98 HEPCGN_19495 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.99 HEPCGN_17830 exbB tol-pal system-associated acyl-CoA thioesterase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF4838 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 0.89 GFF3118 MotA/TolQ/ExbB proton channel family protein low > 78
Enterobacter asburiae PDN3 0.80 EX28DRAFT_2865 23S rRNA (uracil-5-)-methyltransferase RumA 0.85 EX28DRAFT_3045 tonB-system energizer ExbB low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_03654 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.84 MPMX20_03851 Biopolymer transport protein ExbB low > 85
Klebsiella michiganensis M5al 0.79 BWI76_RS22810 23S rRNA (uracil(1939)-C(5))-methyltransferase 0.82 BWI76_RS24280 biopolymer transporter ExbB low > 92
Dickeya dadantii 3937 0.65 DDA3937_RS17020 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.73 DDA3937_RS01820 tol-pal system-associated acyl-CoA thioesterase low > 74
Pantoea sp. MT58 0.64 IAI47_04115 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.71 IAI47_03235 tol-pal system-associated acyl-CoA thioesterase low > 76
Erwinia tracheiphila SCR3 0.59 LU632_RS06345 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.76 LU632_RS20540 exbB tol-pal system-associated acyl-CoA thioesterase low > 74
Sphingomonas koreensis DSMZ 15582 0.14 Ga0059261_0648 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 0.29 Ga0059261_3160 TolQ protein low > 68

Not shown: 76 genomes with orthologs for ECD_02630 only; 0 genomes with orthologs for ECD_02880 only