Conservation of cofitness between ECD_02883 and ECD_02870 in Escherichia coli BL21

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02883 transcriptional activator of yqhD 1.0 ECD_02870 hydrogenase 2, large subunit 0.70 6
Escherichia coli ECOR38 1.00 HEPCGN_17815 yqhC DNA-binding transcriptional regulator YqhC 1.00 HEPCGN_17880 hybC hydrogenase 2 large subunit low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00691 HTH-type transcriptional activator RhaS 1.00 OHPLBJKB_00705 Hydrogenase-2 large chain low > 73
Escherichia coli ECRC102 1.00 NIAGMN_16715 yqhC DNA-binding transcriptional regulator YqhC 1.00 NIAGMN_16785 hybC hydrogenase 2 large subunit — —
Escherichia coli ECRC98 1.00 JDDGAC_22585 yqhC DNA-binding transcriptional regulator YqhC 1.00 JDDGAC_22655 hybC hydrogenase 2 large subunit low > 86
Escherichia coli ECRC62 1.00 BNILDI_00790 yqhC DNA-binding transcriptional regulator YqhC 1.00 BNILDI_00720 hybC hydrogenase 2 large subunit low > 75
Escherichia coli ECRC99 1.00 KEDOAH_09195 yqhC DNA-binding transcriptional regulator YqhC 1.00 KEDOAH_09125 hybC hydrogenase 2 large subunit — —
Escherichia coli ECRC100 1.00 OKFHMN_18950 yqhC DNA-binding transcriptional regulator YqhC 1.00 OKFHMN_19020 hybC hydrogenase 2 large subunit low > 80
Escherichia coli ECRC101 1.00 MCAODC_09465 yqhC DNA-binding transcriptional regulator YqhC 1.00 MCAODC_09535 hybC hydrogenase 2 large subunit low > 87
Escherichia coli BW25113 1.00 b3010 yqhC putative ARAC-type regulatory protein (VIMSS) 1.00 b2994 hybC hydrogenase 2, large subunit (NCBI) low > 76
Escherichia fergusonii Becca 0.99 EFB2_00800 HTH-type transcriptional activator RhaS 1.00 EFB2_00813 Hydrogenase-2 large chain low > 86
Escherichia coli ECOR27 0.99 NOLOHH_10725 yqhC DNA-binding transcriptional regulator YqhC 1.00 NOLOHH_10795 hybC hydrogenase 2 large subunit low > 75
Escherichia coli Nissle 1917 0.93 ECOLIN_RS17325 DNA-binding transcriptional regulator YqhC 1.00 ECOLIN_RS17250 hydrogenase 2 large subunit low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF3122 Transcriptional regulator, AraC family 0.95 GFF3105 Uptake hydrogenase large subunit (EC 1.12.99.6) low > 78
Dickeya dianthicola ME23 0.54 DZA65_RS01775 AraC family transcriptional regulator 0.78 DZA65_RS14890 hydrogenase 2 large subunit low > 75
Dickeya dianthicola 67-19 0.53 HGI48_RS01700 AraC family transcriptional regulator 0.78 HGI48_RS14215 hydrogenase 2 large subunit low > 71
Dickeya dadantii 3937 0.53 DDA3937_RS01805 AraC family transcriptional regulator 0.78 DDA3937_RS14240 hydrogenase 2 large subunit low > 74
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_0530 transcriptional regulator, AraC family (RefSeq) 0.39 DvMF_0270 nickel-dependent hydrogenase large subunit (RefSeq) low > 51
Shewanella loihica PV-4 0.32 Shew_0071 AraC family transcriptional regulator (RefSeq) 0.39 Shew_1764 nickel-dependent hydrogenase, large subunit (RefSeq) low > 60
Shewanella sp. ANA-3 0.22 Shewana3_1698 AraC family transcriptional regulator (RefSeq) 0.42 Shewana3_1879 nickel-dependent hydrogenase, large subunit (RefSeq) low > 73
Shewanella amazonensis SB2B 0.22 Sama_2712 AraC family transcriptional regulator (RefSeq) 0.42 Sama_1678 hydrogenase large chain (RefSeq) low > 62

Not shown: 35 genomes with orthologs for ECD_02883 only; 7 genomes with orthologs for ECD_02870 only