Conservation of cofitness between ECD_03421 and ECD_02794 in Escherichia coli BL21

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03421 xylose divergent operon transcriptional activator 1.0 ECD_02794 nucleoside transporter 0.45 20
Escherichia coli BW25113 1.00 b3569 xylR DNA-binding transcriptional activator, xylose-binding (NCBI) 1.00 b2964 nupG transport of nucleosides, permease protein (VIMSS) low > 76
Escherichia coli ECRC62 1.00 BNILDI_03665 xylR DNA-binding transcriptional regulator XylR 1.00 BNILDI_09630 nupG nucleoside permease NupG low > 75
Escherichia coli ECOR38 1.00 HEPCGN_14820 xylR DNA-binding transcriptional regulator XylR 1.00 HEPCGN_18455 nupG nucleoside permease NupG low > 87
Escherichia coli ECOR27 1.00 NOLOHH_07880 xylR DNA-binding transcriptional regulator XylR 1.00 NOLOHH_11045 nupG nucleoside permease NupG low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00135 Xylose operon regulatory protein 1.00 OHPLBJKB_00752 Nucleoside permease NupG low > 73
Escherichia coli ECRC101 1.00 MCAODC_06450 xylR DNA-binding transcriptional regulator XylR 1.00 MCAODC_09705 nupG nucleoside permease NupG low > 87
Escherichia coli ECRC99 1.00 KEDOAH_12215 xylR DNA-binding transcriptional regulator XylR 1.00 KEDOAH_08955 nupG nucleoside permease NupG — —
Escherichia coli ECRC98 1.00 JDDGAC_19565 xylR DNA-binding transcriptional regulator XylR 1.00 JDDGAC_22815 nupG nucleoside permease NupG low > 86
Escherichia coli ECRC102 1.00 NIAGMN_13695 xylR DNA-binding transcriptional regulator XylR 1.00 NIAGMN_16950 nupG nucleoside permease NupG — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20410 D-xylose utilization transcriptional activator XylR 1.00 ECOLIN_RS16485 nucleoside permease NupG low > 55
Escherichia coli ECRC100 1.00 OKFHMN_15935 xylR DNA-binding transcriptional regulator XylR 1.00 OKFHMN_19185 nupG nucleoside permease NupG low > 80
Escherichia fergusonii Becca 1.00 EFB2_00238 Xylose operon regulatory protein 1.00 EFB2_00938 Nucleoside permease NupG low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF442 Xylose activator XylR (AraC family) 0.93 GFF3069 Nucleoside permease NupG low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_3834 Transcriptional regulators 0.88 EX28DRAFT_3001 nucleoside transporter low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_00161 Xylose operon regulatory protein 0.89 MPMX20_03821 Nucleoside permease NupG low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS27045 XylR family transcriptional regulator 0.89 BWI76_RS24170 nucleoside permease low > 92
Serratia liquefaciens MT49 0.82 IAI46_00300 DNA-binding transcriptional regulator 0.59 IAI46_21845 nucleoside permease low > 86
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS14435 DNA-binding transcriptional regulator 0.48 ABZR86_RS11515 nucleoside permease low > 74
Bacteroides thetaiotaomicron VPI-5482 0.17 BT3609 transcriptional regulator (NCBI ptt file) 0.53 BT4330 xanthosine permease (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.17 BACOVA_03406 transcriptional regulator, AraC family 0.53 BACOVA_05132 nucleoside transporter low > 94

Not shown: 21 genomes with orthologs for ECD_03421 only; 8 genomes with orthologs for ECD_02794 only