Conservation of cofitness between ECD_00806 and ECD_02369 in Escherichia coli BL21

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00806 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a 1.0 ECD_02369 BamABCDE complex OM biogenesis lipoprotein 0.42 19
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02871 D-alanyl-D-alanine carboxypeptidase DacC 1.00 OHPLBJKB_01252 Outer membrane protein assembly factor BamC low > 73
Escherichia coli BW25113 1.00 b0839 dacC D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) (NCBI) 1.00 b2477 nlpB lipoprotein-34 (VIMSS) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_04085 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.99 NIAGMN_19690 bamC outer membrane protein assembly factor BamC — —
Escherichia coli ECRC100 1.00 OKFHMN_06040 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.99 OKFHMN_21920 bamC outer membrane protein assembly factor BamC low > 80
Escherichia coli ECOR38 1.00 HEPCGN_01990 dacC serine-type D-Ala-D-Ala carboxypeptidase 1.00 HEPCGN_21090 bamC outer membrane protein assembly factor BamC low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04460 serine-type D-Ala-D-Ala carboxypeptidase 1.00 ECOLIN_RS14140 outer membrane protein assembly factor BamC — —
Escherichia coli ECRC98 1.00 JDDGAC_09675 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.99 JDDGAC_25865 bamC outer membrane protein assembly factor BamC low > 86
Escherichia coli ECRC62 1.00 BNILDI_20670 dacC serine-type D-Ala-D-Ala carboxypeptidase 1.00 BNILDI_12390 bamC outer membrane protein assembly factor BamC low > 75
Escherichia coli ECRC101 1.00 MCAODC_25255 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.99 MCAODC_12450 bamC outer membrane protein assembly factor BamC low > 87
Escherichia coli ECOR27 1.00 NOLOHH_22410 dacC serine-type D-Ala-D-Ala carboxypeptidase 1.00 NOLOHH_13580 bamC outer membrane protein assembly factor BamC low > 75
Escherichia coli ECRC99 1.00 KEDOAH_21870 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.99 KEDOAH_06300 bamC outer membrane protein assembly factor BamC — —
Escherichia fergusonii Becca 1.00 EFB2_03267 D-alanyl-D-alanine carboxypeptidase DacC 1.00 EFB2_01409 Outer membrane protein assembly factor BamC low > 86
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2127 D-alanyl-D-alanine carboxypeptidase 0.89 EX28DRAFT_0183 Uncharacterized lipoprotein low > 76
Enterobacter sp. TBS_079 0.90 MPMX20_01477 D-alanyl-D-alanine carboxypeptidase DacC 0.89 MPMX20_03339 Outer membrane protein assembly factor BamC low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF744 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.94 GFF2181 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor low > 78
Klebsiella michiganensis M5al 0.85 BWI76_RS09145 serine-type D-Ala-D-Ala carboxypeptidase 0.84 BWI76_RS20900 outer membrane protein assembly factor BamC low > 92
Pantoea sp. MT58 0.75 IAI47_13090 serine hydrolase 0.65 IAI47_05270 outer membrane protein assembly factor BamC low > 76
Pectobacterium carotovorum WPP14 0.72 HER17_RS12545 serine hydrolase 0.65 HER17_RS15410 outer membrane protein assembly factor BamC low > 75
Serratia liquefaciens MT49 0.71 IAI46_08285 serine hydrolase 0.66 IAI46_18775 outer membrane protein assembly factor BamC low > 86
Dickeya dadantii 3937 0.68 DDA3937_RS09420 serine hydrolase 0.61 DDA3937_RS06070 outer membrane protein assembly factor BamC low > 74
Dickeya dianthicola 67-19 0.68 HGI48_RS09435 serine hydrolase 0.61 HGI48_RS06115 outer membrane protein assembly factor BamC low > 71
Dickeya dianthicola ME23 0.67 DZA65_RS09745 D-alanyl-D-alanine carboxypeptidase 0.61 DZA65_RS06465 outer membrane protein assembly factor BamC low > 75
Rahnella sp. WP5 0.65 EX31_RS09695 D-alanyl-D-alanine carboxypeptidase 0.65 EX31_RS22745 outer membrane protein assembly factor BamC low > 89
Alteromonas macleodii MIT1002 0.47 MIT1002_01848 D-alanyl-D-alanine carboxypeptidase DacC precursor 0.14 MIT1002_02206 Outer membrane protein assembly factor BamC precursor — —
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_0079 D-alanyl-D-alanine carboxypeptidase 0.08 B158DRAFT_2445 Beta-barrel assembly machine subunit BamC — —

Not shown: 48 genomes with orthologs for ECD_00806 only; 6 genomes with orthologs for ECD_02369 only