Conservation of cofitness between ECD_03421 and ECD_01573 in Escherichia coli BL21

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03421 xylose divergent operon transcriptional activator 1.0 ECD_01573 DUF1471 family periplasmic protein 0.43 35
Escherichia coli ECRC98 1.00 JDDGAC_19565 xylR DNA-binding transcriptional regulator XylR 1.00 JDDGAC_02275 ydgH DUF1471 domain-containing protein low > 86
Escherichia coli ECOR38 1.00 HEPCGN_14820 xylR DNA-binding transcriptional regulator XylR 1.00 HEPCGN_06060 ydgH DUF1471 domain-containing protein low > 87
Escherichia coli ECRC100 1.00 OKFHMN_15935 xylR DNA-binding transcriptional regulator XylR 1.00 OKFHMN_27685 ydgH DUF1471 domain-containing protein 0.61 23
Escherichia coli ECRC62 1.00 BNILDI_03665 xylR DNA-binding transcriptional regulator XylR 1.00 BNILDI_16980 ydgH DUF1471 domain-containing protein low > 75
Escherichia coli BW25113 1.00 b3569 xylR DNA-binding transcriptional activator, xylose-binding (NCBI) 1.00 b1604 ydgH hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20410 D-xylose utilization transcriptional activator XylR 1.00 ECOLIN_RS08960 DUF1471 family protein YdgH — —
Escherichia coli ECRC99 1.00 KEDOAH_12215 xylR DNA-binding transcriptional regulator XylR 1.00 KEDOAH_00420 ydgH DUF1471 domain-containing protein — —
Escherichia coli ECRC102 1.00 NIAGMN_13695 xylR DNA-binding transcriptional regulator XylR 1.00 NIAGMN_00390 ydgH DUF1471 domain-containing protein — —
Escherichia coli ECOR27 1.00 NOLOHH_07880 xylR DNA-binding transcriptional regulator XylR 1.00 NOLOHH_18190 ydgH DUF1471 domain-containing protein low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00135 Xylose operon regulatory protein 1.00 OHPLBJKB_02122 Protein YdgH low > 73
Escherichia coli ECRC101 1.00 MCAODC_06450 xylR DNA-binding transcriptional regulator XylR 1.00 MCAODC_17725 ydgH DUF1471 domain-containing protein low > 87
Escherichia fergusonii Becca 1.00 EFB2_00238 Xylose operon regulatory protein 1.00 EFB2_02388 Protein YdgH low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF442 Xylose activator XylR (AraC family) 0.86 GFF1797 Protein ydgH precursor low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_3834 Transcriptional regulators 0.80 EX28DRAFT_1545 Protein of unknown function (DUF1471) low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_00161 Xylose operon regulatory protein 0.80 MPMX20_02030 Protein YdgH low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS27045 XylR family transcriptional regulator 0.76 BWI76_RS16215 hypothetical protein low > 92
Pantoea sp. MT58 0.84 IAI47_00175 XylR family transcriptional regulator 0.61 IAI47_09560 DUF1471 domain-containing protein low > 76
Rahnella sp. WP5 0.84 EX31_RS09745 XylR family transcriptional regulator 0.66 EX31_RS07220 DUF1471 domain-containing protein low > 89
Serratia liquefaciens MT49 0.82 IAI46_00300 DNA-binding transcriptional regulator 0.67 IAI46_13280 DUF1471 domain-containing protein low > 86
Pectobacterium carotovorum WPP14 0.82 HER17_RS21065 XylR family transcriptional regulator 0.64 HER17_RS10505 DUF1471 family protein YdgH low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS00330 XylR family transcriptional regulator 0.54 HGI48_RS10920 DUF1471 domain-containing protein low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS00330 DNA-binding transcriptional regulator 0.58 DZA65_RS11380 DUF1471 domain-containing protein low > 75
Dickeya dadantii 3937 0.81 DDA3937_RS20915 DNA-binding transcriptional regulator 0.55 DDA3937_RS10970 DUF1471 domain-containing protein low > 74

Not shown: 18 genomes with orthologs for ECD_03421 only; 1 genomes with orthologs for ECD_01573 only