Conservation of cofitness between ECD_00806 and ECD_01562 in Escherichia coli BL21

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00806 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a 1.0 ECD_01562 putative dethiobiotin synthetase 0.40 31
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02871 D-alanyl-D-alanine carboxypeptidase DacC 1.00 OHPLBJKB_02133 ATP-dependent dethiobiotin synthetase BioD 1 low > 73
Escherichia coli BW25113 1.00 b0839 dacC D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) (NCBI) 1.00 b1593 b1593 orf, hypothetical protein (VIMSS) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04460 serine-type D-Ala-D-Ala carboxypeptidase 1.00 ECOLIN_RS08900 dethiobiotin synthase — —
Escherichia coli ECRC100 1.00 OKFHMN_06040 dacC serine-type D-Ala-D-Ala carboxypeptidase 1.00 OKFHMN_27745 bioD dethiobiotin synthase — —
Escherichia coli ECRC101 1.00 MCAODC_25255 dacC serine-type D-Ala-D-Ala carboxypeptidase 1.00 MCAODC_17665 bioD dethiobiotin synthase — —
Escherichia coli ECOR27 1.00 NOLOHH_22410 dacC serine-type D-Ala-D-Ala carboxypeptidase 1.00 NOLOHH_18250 bioD dethiobiotin synthase — —
Escherichia coli ECRC99 1.00 KEDOAH_21870 dacC serine-type D-Ala-D-Ala carboxypeptidase 1.00 KEDOAH_00360 bioD dethiobiotin synthase — —
Escherichia coli ECRC102 1.00 NIAGMN_04085 dacC serine-type D-Ala-D-Ala carboxypeptidase 1.00 NIAGMN_00330 bioD dethiobiotin synthase — —
Escherichia coli ECOR38 1.00 HEPCGN_01990 dacC serine-type D-Ala-D-Ala carboxypeptidase 1.00 HEPCGN_06120 bioD dethiobiotin synthase low > 87
Escherichia coli ECRC98 1.00 JDDGAC_09675 dacC serine-type D-Ala-D-Ala carboxypeptidase 1.00 JDDGAC_02335 bioD dethiobiotin synthase low > 86
Escherichia coli ECRC62 1.00 BNILDI_20670 dacC serine-type D-Ala-D-Ala carboxypeptidase 1.00 BNILDI_17040 bioD dethiobiotin synthase low > 75
Escherichia fergusonii Becca 1.00 EFB2_03267 D-alanyl-D-alanine carboxypeptidase DacC 1.00 EFB2_02399 ATP-dependent dethiobiotin synthetase BioD 1 low > 86
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2127 D-alanyl-D-alanine carboxypeptidase 0.88 EX28DRAFT_1492 dethiobiotin synthase low > 76
Enterobacter sp. TBS_079 0.90 MPMX20_01477 D-alanyl-D-alanine carboxypeptidase DacC 0.88 MPMX20_02064 ATP-dependent dethiobiotin synthetase BioD 1 low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF744 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.95 GFF1784 Dethiobiotin synthetase (EC 6.3.3.3) low > 78
Klebsiella michiganensis M5al 0.85 BWI76_RS09145 serine-type D-Ala-D-Ala carboxypeptidase 0.89 BWI76_RS15950 dethiobiotin synthase low > 92
Pantoea sp. MT58 0.75 IAI47_13090 serine hydrolase 0.64 IAI47_09755 ATP-dependent dethiobiotin synthetase BioD low > 76
Pectobacterium carotovorum WPP14 0.72 HER17_RS12545 serine hydrolase 0.68 HER17_RS10730 dethiobiotin synthase low > 75
Serratia liquefaciens MT49 0.71 IAI46_08285 serine hydrolase 0.66 IAI46_11690 ATP-dependent dethiobiotin synthetase BioD low > 86
Dickeya dadantii 3937 0.68 DDA3937_RS09420 serine hydrolase 0.67 DDA3937_RS10680 ATP-dependent dethiobiotin synthetase BioD 0.38 14
Dickeya dianthicola 67-19 0.68 HGI48_RS09435 serine hydrolase 0.67 HGI48_RS10680 ATP-dependent dethiobiotin synthetase BioD low > 71
Dickeya dianthicola ME23 0.67 DZA65_RS09745 D-alanyl-D-alanine carboxypeptidase 0.67 DZA65_RS11150 ATP-dependent dethiobiotin synthetase BioD low > 75
Rahnella sp. WP5 0.65 EX31_RS09695 D-alanyl-D-alanine carboxypeptidase 0.55 EX31_RS16980 ATP-dependent dethiobiotin synthetase BioD low > 89

Not shown: 50 genomes with orthologs for ECD_00806 only; 2 genomes with orthologs for ECD_01562 only