Conservation of cofitness between ECD_02276 and ECD_00901 in Escherichia coli BL21

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02276 D-serine dehydratase 1.0 ECD_00901 putative isochorismatase family hydrolase 0.71 20
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01355 D-serine dehydratase 1.00 OHPLBJKB_02771 putative hydrolase YcaC low > 73
Escherichia coli ECRC62 1.00 BNILDI_12985 dsdA D-serine ammonia-lyase 1.00 BNILDI_20355 ycaC putative hydrolase YcaC low > 75
Escherichia coli BW25113 1.00 b2366 dsdA D-serine dehydratase (NCBI) 1.00 b0897 ycaC predicted hydrolase (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_14130 dsdA D-serine ammonia-lyase 1.00 NOLOHH_22100 ycaC putative hydrolase YcaC low > 75
Escherichia coli ECRC102 0.99 NIAGMN_20225 dsdA D-serine ammonia-lyase 1.00 NIAGMN_03250 ycaC putative hydrolase YcaC — —
Escherichia coli ECRC99 0.99 KEDOAH_05775 dsdA D-serine ammonia-lyase 1.00 KEDOAH_22205 ycaC putative hydrolase YcaC — —
Escherichia coli ECRC98 0.99 JDDGAC_26410 dsdA D-serine ammonia-lyase 1.00 JDDGAC_09340 ycaC putative hydrolase YcaC low > 86
Escherichia coli ECRC101 0.99 MCAODC_12980 dsdA D-serine ammonia-lyase 1.00 MCAODC_24920 ycaC putative hydrolase YcaC low > 87
Escherichia coli ECRC100 0.99 OKFHMN_22450 dsdA D-serine ammonia-lyase 1.00 OKFHMN_05530 ycaC putative hydrolase YcaC low > 80
Escherichia fergusonii Becca 0.99 EFB2_04196 D-serine dehydratase 1.00 EFB2_03164 putative hydrolase YcaC low > 86
Escherichia coli ECOR38 0.99 HEPCGN_21655 dsdA D-serine ammonia-lyase 0.99 HEPCGN_22980 ycaC putative hydrolase YcaC low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS13620 D-serine ammonia-lyase 1.00 ECOLIN_RS04770 isochorismate family cysteine hydrolase YcaC low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF293 D-serine dehydratase (EC 4.3.1.18) 0.43 GFF336 Nicotinamidase family protein YcaC low > 78
Klebsiella michiganensis M5al 0.87 BWI76_RS27860 D-serine dehydratase 0.91 BWI76_RS13305 hydrolase — —
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3966 D-serine ammonia-lyase (EC 4.3.1.18) 0.41 EX28DRAFT_1901 Amidases related to nicotinamidase low > 76
Enterobacter sp. TBS_079 0.81 MPMX20_00023 D-serine dehydratase 0.41 MPMX20_01711 putative hydrolase YcaC low > 85
Serratia liquefaciens MT49 0.69 IAI46_12905 D-serine ammonia-lyase 0.88 IAI46_04570 hydrolase low > 86
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS41275 D-serine ammonia-lyase 0.31 QEN71_RS37400 hydrolase low > 153
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_3648 D-serine ammonia-lyase (EC 4.3.1.18) (from data) 0.88 PfGW456L13_2405 Nicotinamidase family protein YcaC low > 87
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_25210 D-serine ammonia-lyase (EC 4.3.1.18) (from data) 0.90 AO353_19675 hypothetical protein low > 101
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS28450 serine dehydratase 0.32 RR42_RS07715 hydrolase low > 128

Not shown: 7 genomes with orthologs for ECD_02276 only; 27 genomes with orthologs for ECD_00901 only