Conservation of cofitness between ECD_00807 and ECD_00535 in Escherichia coli BL21

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00807 deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx 1.0 ECD_00535 copper/silver efflux system, membrane fusion protein 0.58 1
Escherichia coli ECRC101 1.00 MCAODC_25250 deoR DNA-binding transcriptional repressor DeoR 1.00 MCAODC_26905 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB — —
Escherichia coli ECRC101 1.00 OKFHMN_06035 deoR DNA-binding transcriptional repressor DeoR 1.00 OKFHMN_07690 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB — —
Escherichia coli ECRC99 1.00 KEDOAH_21875 deoR DNA-binding transcriptional repressor DeoR 1.00 KEDOAH_20280 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB — —
Escherichia coli BW25113 1.00 b0840 deoR DNA-binding transcriptional repressor (NCBI) 1.00 b0574 cusB copper/silver efflux system, membrane fusion protein (NCBI) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_04080 deoR DNA-binding transcriptional repressor DeoR 1.00 NIAGMN_05745 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02870 Deoxyribose operon repressor 1.00 OHPLBJKB_03135 Cation efflux system protein CusB low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04465 DNA-binding transcriptional repressor DeoR 0.99 ECOLIN_RS03140 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB — —
Escherichia coli ECRC98 1.00 JDDGAC_09670 deoR DNA-binding transcriptional repressor DeoR 1.00 JDDGAC_11335 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB — —
Escherichia fergusonii Becca 1.00 EFB2_03266 Deoxyribose operon repressor 0.99 EFB2_03520 Cation efflux system protein CusB low > 86
Escherichia coli ECOR38 1.00 HEPCGN_01995 deoR DNA-binding transcriptional repressor DeoR 0.99 HEPCGN_00600 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB low > 85
Escherichia coli ECRC62 1.00 BNILDI_20665 deoR DNA-binding transcriptional repressor DeoR 0.99 BNILDI_22080 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB — —
Escherichia coli ECOR27 1.00 NOLOHH_22405 deoR DNA-binding transcriptional repressor DeoR 1.00 NOLOHH_24070 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB low > 57
Enterobacter sp. TBS_079 0.84 MPMX20_01478 Deoxyribose operon repressor 0.71 MPMX20_02316 Cation efflux system protein CusB low > 85
Enterobacter asburiae PDN3 0.83 EX28DRAFT_2126 transcriptional regulator, DeoR family 0.70 EX28DRAFT_1168 RND family efflux transporter, MFP subunit low > 76
Klebsiella michiganensis M5al 0.79 BWI76_RS09150 DNA-binding transcriptional repressor DeoR 0.33 BWI76_RS15145 efflux transporter periplasmic adaptor subunit low > 92
Serratia liquefaciens MT49 0.57 IAI46_08300 DNA-binding transcriptional repressor DeoR 0.31 IAI46_17970 efflux RND transporter periplasmic adaptor subunit low > 86
Pectobacterium carotovorum WPP14 0.56 HER17_RS12540 DNA-binding transcriptional repressor DeoR 0.32 HER17_RS14790 efflux RND transporter periplasmic adaptor subunit low > 75
Dickeya dianthicola ME23 0.55 DZA65_RS09750 DNA-binding transcriptional repressor DeoR 0.71 DZA65_RS03610 efflux RND transporter periplasmic adaptor subunit low > 75
Dickeya dianthicola 67-19 0.54 HGI48_RS09440 DNA-binding transcriptional repressor DeoR 0.70 HGI48_RS03500 efflux RND transporter periplasmic adaptor subunit low > 71
Rahnella sp. WP5 0.53 EX31_RS24185 DNA-binding transcriptional repressor DeoR 0.32 EX31_RS10840 efflux RND transporter periplasmic adaptor subunit low > 89
Azospirillum sp. SherDot2 0.31 MPMX19_02950 Deoxyribose operon repressor 0.23 MPMX19_06408 Cation efflux system protein CusB low > 112
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS05125 DeoR family transcripitonal regulator 0.08 HSERO_RS22165 cytochrome C peroxidase low > 78

Not shown: 11 genomes with orthologs for ECD_00807 only; 11 genomes with orthologs for ECD_00535 only