Conservation of cofitness between ECD_00067 and ECD_00371 in Escherichia coli BL21

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00067 DedA family inner membrane protein 1.0 ECD_00371 tRNA s(4)U8 sulfurtransferase 0.72 12
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03593 Inner membrane protein YabI 1.00 OHPLBJKB_03253 tRNA sulfurtransferase low > 73
Escherichia coli ECOR38 1.00 HEPCGN_08750 yabI Inner membrane protein YabI 1.00 HEPCGN_07035 thiI tRNA sulfurtransferase low > 85
Escherichia coli BW25113 1.00 b0065 yabI conserved inner membrane protein (NCBI) 1.00 b0423 thiI thiamine biosynthesis protein ThiI (NCBI) low > 76
Escherichia coli ECRC99 1.00 KEDOAH_17385 yabI Inner membrane protein YabI 0.99 KEDOAH_19560 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC101 1.00 OKFHMN_10770 yabI Inner membrane protein YabI 0.99 OKFHMN_08405 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC98 1.00 JDDGAC_14365 yabI Inner membrane protein YabI 0.99 JDDGAC_12060 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC101 1.00 MCAODC_01285 yabI Inner membrane protein YabI 0.99 MCAODC_27630 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC102 1.00 NIAGMN_08620 yabI Inner membrane protein YabI 0.99 NIAGMN_06460 thiI tRNA sulfurtransferase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00355 DedA family protein 1.00 ECOLIN_RS02550 tRNA uracil 4-sulfurtransferase ThiI low > 52
Escherichia coli ECOR27 0.99 NOLOHH_03115 yabI Inner membrane protein YabI 1.00 NOLOHH_01355 thiI tRNA sulfurtransferase low > 57
Escherichia coli ECRC62 0.99 BNILDI_08495 yabI Inner membrane protein YabI 1.00 BNILDI_22770 thiI tRNA sulfurtransferase — —
Escherichia fergusonii Becca 0.98 EFB2_03980 Inner membrane protein YabI 0.99 EFB2_03634 tRNA sulfurtransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF175 DedA family inner membrane protein YabI 0.97 GFF4327 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis low > 78
Enterobacter asburiae PDN3 0.84 EX28DRAFT_3657 Uncharacterized membrane-associated protein 0.90 EX28DRAFT_2548 tRNA sulfurtransferase ThiI/thiazole biosynthesis domain low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_00759 Inner membrane protein YabI 0.91 MPMX20_01014 tRNA sulfurtransferase low > 85
Klebsiella michiganensis M5al 0.78 BWI76_RS04600 inner membrane protein 0.93 BWI76_RS06395 tRNA 4-thiouridine(8) synthase ThiI low > 92
Pectobacterium carotovorum WPP14 0.66 HER17_RS03005 DedA family protein 0.88 HER17_RS15920 tRNA 4-thiouridine(8) synthase ThiI low > 75
Pantoea sp. MT58 0.66 IAI47_16045 DedA family protein 0.80 IAI47_14725 tRNA 4-thiouridine(8) synthase ThiI low > 76
Serratia liquefaciens MT49 0.65 IAI46_03285 DedA family protein 0.85 IAI46_04940 tRNA 4-thiouridine(8) synthase ThiI low > 86
Dickeya dadantii 3937 0.62 DDA3937_RS18180 DedA family protein 0.88 DDA3937_RS05545 tRNA 4-thiouridine(8) synthase ThiI low > 74
Dickeya dianthicola ME23 0.62 DZA65_RS19280 DedA family protein 0.87 DZA65_RS05930 tRNA 4-thiouridine(8) synthase ThiI low > 75
Dickeya dianthicola 67-19 0.62 HGI48_RS18130 DedA family protein 0.88 HGI48_RS05605 tRNA 4-thiouridine(8) synthase ThiI low > 71
Erwinia tracheiphila SCR3 0.61 LU632_RS02820 DedA family protein 0.85 LU632_RS18845 thiI tRNA 4-thiouridine(8) synthase ThiI low > 74
Rahnella sp. WP5 0.57 EX31_RS03735 DedA family protein 0.81 EX31_RS22170 tRNA 4-thiouridine(8) synthase ThiI low > 89

Not shown: 0 genomes with orthologs for ECD_00067 only; 20 genomes with orthologs for ECD_00371 only