Conservation of cofitness between ECD_01478 and ECD_00184 in Escherichia coli BL21

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01478 altronate oxidoreductase, NAD-dependent 1.0 ECD_00184 lysine decarboxylase 2, constitutive 0.49 16
Escherichia coli BW25113 1.00 b1521 uxaB tagaturonate reductase (NCBI) 1.00 b0186 ldcC lysine decarboxylase 2, constitutive (NCBI) 0.25 6
Escherichia coli ECRC102 1.00 NIAGMN_25275 uxaB tagaturonate reductase 1.00 NIAGMN_07975 ldcC lysine decarboxylase LdcC — —
Escherichia coli ECRC98 1.00 JDDGAC_03640 uxaB tagaturonate reductase 1.00 JDDGAC_13720 ldcC lysine decarboxylase LdcC — —
Escherichia coli ECOR27 1.00 NOLOHH_18780 uxaB tagaturonate reductase 1.00 NOLOHH_02470 ldcC lysine decarboxylase LdcC — —
Escherichia coli ECRC101 1.00 MCAODC_16795 uxaB tagaturonate reductase 1.00 MCAODC_00640 ldcC lysine decarboxylase LdcC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02198 Altronate oxidoreductase 1.00 OHPLBJKB_03477 Constitutive lysine decarboxylase low > 73
Escherichia fergusonii Becca 1.00 EFB2_02439 Altronate oxidoreductase 0.99 EFB2_03858 Constitutive lysine decarboxylase low > 86
Escherichia coli ECRC101 1.00 OKFHMN_01130 uxaB tagaturonate reductase 1.00 OKFHMN_10125 ldcC lysine decarboxylase LdcC — —
Escherichia coli ECRC99 1.00 KEDOAH_27300 uxaB tagaturonate reductase 1.00 KEDOAH_18030 ldcC lysine decarboxylase LdcC — —
Escherichia coli ECRC62 0.99 BNILDI_17260 uxaB tagaturonate reductase 1.00 BNILDI_09200 ldcC lysine decarboxylase LdcC — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS08690 tagaturonate reductase 0.99 ECOLIN_RS01010 lysine decarboxylase LdcC low > 52
Escherichia coli ECOR38 0.99 HEPCGN_26630 uxaB tagaturonate reductase 0.99 HEPCGN_08080 ldcC lysine decarboxylase LdcC low > 85
Klebsiella michiganensis M5al 0.90 BWI76_RS15180 altronate oxidoreductase 0.89 BWI76_RS05300 lysine decarboxylase LdcC low > 92
Enterobacter asburiae PDN3 0.89 EX28DRAFT_1191 Mannitol-1-phosphate/altronate dehydrogenases 0.90 EX28DRAFT_3774 Arginine/lysine/ornithine decarboxylases low > 76
Enterobacter sp. TBS_079 0.89 MPMX20_02276 Altronate oxidoreductase 0.90 MPMX20_00870 Constitutive lysine decarboxylase low > 85
Rahnella sp. WP5 0.72 EX31_RS12680 tagaturonate reductase 0.81 EX31_RS12950 lysine decarboxylase LdcC low > 89
Pantoea sp. MT58 0.58 IAI47_02915 tagaturonate reductase 0.84 IAI47_15445 lysine decarboxylase LdcC low > 76

Not shown: 15 genomes with orthologs for ECD_01478 only; 5 genomes with orthologs for ECD_00184 only