Conservation of cofitness between DZA65_RS16950 and DZA65_RS11140 in Dickeya dianthicola ME23

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS16950 autonomous glycyl radical cofactor GrcA 1.0 DZA65_RS11140 LysR family transcriptional regulator 0.46 15
Dickeya dianthicola 67-19 1.00 HGI48_RS15870 autonomous glycyl radical cofactor GrcA 0.99 HGI48_RS10670 LysR family transcriptional regulator low > 71
Dickeya dadantii 3937 0.98 DDA3937_RS15785 autonomous glycyl radical cofactor GrcA 0.98 DDA3937_RS10670 LysR family transcriptional regulator low > 74
Pectobacterium carotovorum WPP14 0.91 HER17_RS05760 autonomous glycyl radical cofactor GrcA 0.77 HER17_RS10740 LysR family transcriptional regulator low > 75
Rahnella sp. WP5 0.89 EX31_RS21780 autonomous glycyl radical cofactor GrcA 0.60 EX31_RS16990 LysR family transcriptional regulator low > 89
Serratia liquefaciens MT49 0.88 IAI46_19615 autonomous glycyl radical cofactor GrcA 0.71 IAI46_11680 LysR family transcriptional regulator low > 86
Pantoea sp. MT58 0.87 IAI47_04830 autonomous glycyl radical cofactor GrcA 0.60 IAI47_09745 LysR family transcriptional regulator low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF2101 Pyruvate formate-lyase (EC 2.3.1.54) 0.58 GFF1786 LysR family transcriptional regulator YnfL — —
Escherichia fergusonii Becca 0.85 EFB2_01317 Autonomous glycyl radical cofactor 0.58 EFB2_02397 Hca operon transcriptional activator HcaR low > 86
Escherichia coli Nissle 1917 0.85 ECOLIN_RS14595 autonomous glycyl radical cofactor GrcA 0.58 ECOLIN_RS08910 LysR family transcriptional regulator — —
Escherichia coli ECOR38 0.85 HEPCGN_20470 grcA autonomous glycyl radical cofactor GrcA 0.58 HEPCGN_06110 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 87
Escherichia coli ECRC102 0.84 NIAGMN_19115 grcA autonomous glycyl radical cofactor GrcA 0.58 NIAGMN_00340 ynfL Uncharacterized HTH-type transcriptional regulator YnfL — —
Escherichia coli ECRC98 0.84 JDDGAC_25010 grcA autonomous glycyl radical cofactor GrcA 0.58 JDDGAC_02325 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 86
Escherichia coli BW25113 0.84 b2579 yfiD pyruvate formate lyase subunit (NCBI) 0.58 b1595 ynfL predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECOR27 0.84 NOLOHH_13015 grcA autonomous glycyl radical cofactor GrcA 0.58 NOLOHH_18240 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 75
Escherichia coli ECRC100 0.84 OKFHMN_21345 grcA autonomous glycyl radical cofactor GrcA 0.58 OKFHMN_27735 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 80
Escherichia coli ECRC101 0.84 MCAODC_11875 grcA autonomous glycyl radical cofactor GrcA 0.58 MCAODC_17675 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 87
Escherichia coli ECRC99 0.84 KEDOAH_06875 grcA autonomous glycyl radical cofactor GrcA 0.58 KEDOAH_00370 ynfL Uncharacterized HTH-type transcriptional regulator YnfL — —
Enterobacter sp. TBS_079 0.84 MPMX20_03448 Autonomous glycyl radical cofactor 0.57 MPMX20_02062 Hca operon transcriptional activator HcaR low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_01127 Autonomous glycyl radical cofactor 0.58 OHPLBJKB_02131 Hca operon transcriptional activator HcaR low > 73
Escherichia coli ECRC62 0.84 BNILDI_11820 grcA autonomous glycyl radical cofactor GrcA 0.58 BNILDI_17030 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 75
Escherichia coli BL21 0.84 ECD_02473 autonomous glycyl radical cofactor 0.58 ECD_01564 LysR family putative transcriptional regulator — —
Klebsiella michiganensis M5al 0.84 BWI76_RS21375 autonomous glycyl radical cofactor GrcA 0.54 BWI76_RS15960 LysR family transcriptional regulator low > 92
Enterobacter asburiae PDN3 0.83 EX28DRAFT_0068 autonomous glycyl radical cofactor GrcA 0.58 EX28DRAFT_1494 Transcriptional regulator low > 76

Not shown: 2 genomes with orthologs for DZA65_RS16950 only; 45 genomes with orthologs for DZA65_RS11140 only