Conservation of cofitness between DDA3937_RS05545 and DDA3937_RS09530 in Dickeya dadantii 3937

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dadantii 3937 1.0 DDA3937_RS05545 tRNA 4-thiouridine(8) synthase ThiI 1.0 DDA3937_RS09530 DUF2867 domain-containing protein 0.81 16
Dickeya dianthicola ME23 0.98 DZA65_RS05930 tRNA 4-thiouridine(8) synthase ThiI 0.95 DZA65_RS09855 DUF2867 domain-containing protein low > 75
Dickeya dianthicola 67-19 0.97 HGI48_RS05605 tRNA 4-thiouridine(8) synthase ThiI 0.95 HGI48_RS09545 DUF2867 domain-containing protein low > 71
Pectobacterium carotovorum WPP14 0.93 HER17_RS15920 tRNA 4-thiouridine(8) synthase ThiI 0.67 HER17_RS12435 DUF2867 domain-containing protein low > 75
Serratia liquefaciens MT49 0.88 IAI46_04940 tRNA 4-thiouridine(8) synthase ThiI 0.63 IAI46_08450 DUF2867 domain-containing protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF4327 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis 0.56 GFF4913 FIG00638862: hypothetical protein low > 78
Klebsiella michiganensis M5al 0.87 BWI76_RS06395 tRNA 4-thiouridine(8) synthase ThiI 0.57 BWI76_RS09545 NAD-dependent epimerase/dehydratase low > 92
Escherichia fergusonii Becca 0.87 EFB2_03634 tRNA sulfurtransferase 0.58 EFB2_03192 hypothetical protein low > 86
Escherichia coli ECRC101 0.87 MCAODC_27630 thiI tRNA sulfurtransferase 0.58 MCAODC_25070 ybjT Putative NAD(P)-binding protein YbjT low > 87
Escherichia coli ECRC99 0.87 KEDOAH_19560 thiI tRNA sulfurtransferase 0.58 KEDOAH_22055 ybjT Putative NAD(P)-binding protein YbjT — —
Escherichia coli ECRC98 0.87 JDDGAC_12060 thiI tRNA sulfurtransferase 0.58 JDDGAC_09490 ybjT Putative NAD(P)-binding protein YbjT low > 86
Escherichia coli ECRC102 0.87 NIAGMN_06460 thiI tRNA sulfurtransferase 0.58 NIAGMN_03895 ybjT Putative NAD(P)-binding protein YbjT — —
Escherichia coli ECRC100 0.87 OKFHMN_08405 thiI tRNA sulfurtransferase 0.58 OKFHMN_05855 ybjT Putative NAD(P)-binding protein YbjT low > 80
Escherichia coli Nissle 1917 0.85 ECOLIN_RS02550 tRNA uracil 4-sulfurtransferase ThiI 0.58 ECOLIN_RS04625 SDR family oxidoreductase low > 55
Escherichia coli ECOR38 0.85 HEPCGN_07035 thiI tRNA sulfurtransferase 0.58 HEPCGN_02160 ybjT Putative NAD(P)-binding protein YbjT low > 87
Escherichia coli ECOR27 0.85 NOLOHH_01355 thiI tRNA sulfurtransferase 0.58 NOLOHH_22250 ybjT Putative NAD(P)-binding protein YbjT low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_03253 tRNA sulfurtransferase 0.58 OHPLBJKB_02799 hypothetical protein low > 73
Escherichia coli BW25113 0.85 b0423 thiI thiamine biosynthesis protein ThiI (NCBI) 0.58 b0869 ybjT putative dTDP-glucose enzyme (VIMSS) low > 76
Escherichia coli BL21 0.85 ECD_00371 tRNA s(4)U8 sulfurtransferase 0.57 ECD_00874 putative NAD-dependent oxidoreductase low > 61
Escherichia coli ECRC62 0.85 BNILDI_22770 thiI tRNA sulfurtransferase 0.58 BNILDI_20505 ybjT Putative NAD(P)-binding protein YbjT low > 75
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2548 tRNA sulfurtransferase ThiI/thiazole biosynthesis domain 0.56 EX28DRAFT_2064 Predicted nucleoside-diphosphate-sugar epimerases low > 76
Enterobacter sp. TBS_079 0.84 MPMX20_01014 tRNA sulfurtransferase 0.56 MPMX20_01530 hypothetical protein low > 85
Rahnella sp. WP5 0.83 EX31_RS22170 tRNA 4-thiouridine(8) synthase ThiI 0.58 EX31_RS18610 SDR family oxidoreductase low > 89
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_04585 tRNA 4-thiouridine(8) synthase ThiI 0.41 CSW01_08205 DUF2867 domain-containing protein low > 62

Not shown: 21 genomes with orthologs for DDA3937_RS05545 only; 5 genomes with orthologs for DDA3937_RS09530 only