Conservation of cofitness between CSW01_17605 and CSW01_10000 in Vibrio cholerae E7946 ATCC 55056

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17605 DNA-binding response regulator 1.0 CSW01_10000 23S rRNA (guanine(745)-N(1))-methyltransferase 0.43 16
Pectobacterium carotovorum WPP14 0.60 HER17_RS14245 response regulator transcription factor 0.53 HER17_RS11350 23S rRNA (guanine(745)-N(1))-methyltransferase low > 75
Klebsiella michiganensis M5al 0.57 BWI76_RS06060 DNA-binding response regulator 0.53 BWI76_RS17920 23S rRNA (guanine(745)-N(1))-methyltransferase low > 92
Escherichia coli ECRC99 0.55 KEDOAH_19265 citB DNA-binding response regulator 0.55 KEDOAH_01605 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase — —
Escherichia coli ECRC100 0.55 OKFHMN_08705 citB DNA-binding response regulator 0.55 OKFHMN_26500 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase low > 79
Escherichia coli ECRC101 0.55 MCAODC_27935 citB DNA-binding response regulator 0.55 MCAODC_18905 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase low > 87
Escherichia coli ECRC98 0.55 JDDGAC_12360 citB DNA-binding response regulator 0.55 JDDGAC_01075 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase low > 87
Escherichia coli ECRC102 0.55 NIAGMN_06760 citB DNA-binding response regulator 0.55 NIAGMN_01560 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase low > 80
Enterobacter asburiae PDN3 0.45 EX28DRAFT_3952 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 0.55 EX28DRAFT_0737 Methyltransferase domain low > 76
Escherichia coli ECRC62 0.45 BNILDI_04190 uhpA_G97D DNA-binding response regulator UhpA 0.55 BNILDI_15805 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase low > 75
Escherichia coli BW25113 0.45 b3669 uhpA DNA-binding response regulator in two-component regulatory system wtih UhpB (NCBI) 0.56 b1822 rrmA 23S rRNA m1G745 methyltransferase (NCBI) low > 76
Escherichia coli ECOR38 0.45 HEPCGN_13905 uhpA_G97D DNA-binding response regulator UhpA 0.55 HEPCGN_04900 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_00031 Transcriptional regulatory protein UhpA 0.56 OHPLBJKB_01908 23S rRNA (guanine(745)-N(1))-methyltransferase low > 74
Escherichia fergusonii Becca 0.45 EFB2_00029 Transcriptional regulatory protein UhpA 0.54 EFB2_02178 23S rRNA (guanine(745)-N(1))-methyltransferase low > 86
Escherichia coli ECOR27 0.45 NOLOHH_07335 uhpA_G97D DNA-binding response regulator UhpA 0.54 NOLOHH_17025 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase low > 76
Escherichia coli BL21 0.45 ECD_03553 response regulator in two-component regulatory system wtih UhpB 0.55 ECD_01792 23S rRNA m(1)G745 methyltransferase, SAM-dependent low > 61
Escherichia coli Nissle 1917 0.45 ECOLIN_RS21160 transcriptional regulator UhpA 0.54 ECOLIN_RS10140 23S rRNA (guanine(745)-N(1))-methyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF304 Transcriptional regulatory protein UhpA 0.51 GFF2836 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) low > 78
Klebsiella pneumoniae MKP103 0.44 KDGMDA_08505 transcriptional regulator UhpA 0.53 KDGMDA_25200 23S rRNA (guanine(745)-N(1))-methyltransferase low > 95
Enterobacter sp. TBS_079 0.44 MPMX20_00033 Transcriptional regulatory protein UhpA 0.56 MPMX20_02727 23S rRNA (guanine(745)-N(1))-methyltransferase low > 85
Dickeya dianthicola 67-19 0.44 HGI48_RS02840 transcriptional regulator UhpA 0.47 HGI48_RS11340 23S rRNA (guanine(745)-N(1))-methyltransferase low > 71
Dickeya dianthicola ME23 0.44 DZA65_RS03015 transcriptional regulator UhpA 0.47 DZA65_RS11685 23S rRNA (guanine(745)-N(1))-methyltransferase low > 75
Dickeya dadantii 3937 0.44 DDA3937_RS02865 transcriptional regulator UhpA 0.47 DDA3937_RS11305 23S rRNA (guanine(745)-N(1))-methyltransferase low > 74
Pantoea agglomerans CFBP13505 P0401 0.42 PagCFBP13505_RS08630 transcriptional regulator UhpA 0.54 PagCFBP13505_RS02580 23S rRNA (guanine(745)-N(1))-methyltransferase low > 74
Serratia liquefaciens MT49 0.42 IAI46_00435 transcriptional regulator UhpA 0.58 IAI46_14835 23S rRNA (guanine(745)-N(1))-methyltransferase low > 87
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_14380 transcriptional regulator 0.34 AO356_06095 SAM-dependent methyltransferase low > 104
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_3685 DNA-binding response regulator, LuxR family 0.35 PfGW456L13_4722 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) low > 87
Alteromonas macleodii MIT1002 0.30 MIT1002_03339 Response regulator UvrY 0.34 MIT1002_01980 23S rRNA (guanine(745)-N(1))-methyltransferase low > 70

Not shown: 11 genomes with orthologs for CSW01_17605 only; 33 genomes with orthologs for CSW01_10000 only