Conservation of cofitness between CSW01_05770 and CSW01_07815 in Vibrio cholerae E7946 ATCC 55056

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05770 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 1.0 CSW01_07815 YhcH/YjgK/YiaL family protein 0.44 20
Escherichia coli ECRC62 0.68 BNILDI_14720 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.37 BNILDI_07405 tabA toxin-antitoxin biofilm protein TabA low > 75
Escherichia fergusonii Becca 0.68 EFB2_01832 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.36 EFB2_04282 Toxin-antitoxin biofilm protein TabA low > 86
Escherichia coli ECOR27 0.68 NOLOHH_15810 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.37 NOLOHH_04105 tabA toxin-antitoxin biofilm protein TabA low > 75
Escherichia coli BL21 0.68 ECD_01926 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase 0.36 ECD_04118 biofilm modulator regulated by toxins; DUF386 family protein, cupin superfamily protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_01676 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.36 OHPLBJKB_03785 Toxin-antitoxin biofilm protein TabA low > 74
Pectobacterium carotovorum WPP14 0.68 HER17_RS12250 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.34 HER17_RS19505 YhcH/YjgK/YiaL family protein low > 75
Escherichia coli ECOR38 0.68 HEPCGN_03200 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.36 HEPCGN_10030 YhcH/YjgK/YiaL family protein low > 88
Escherichia coli ECRC98 0.67 JDDGAC_28605 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.37 JDDGAC_15485 tabA toxin-antitoxin biofilm protein TabA low > 87
Escherichia coli ECRC99 0.67 KEDOAH_03655 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.37 KEDOAH_16310 tabA toxin-antitoxin biofilm protein TabA — —
Dickeya dianthicola 67-19 0.67 HGI48_RS09725 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.33 HGI48_RS01905 YhcH/YjgK/YiaL family protein — —
Escherichia coli ECRC100 0.67 OKFHMN_24495 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.37 OKFHMN_11845 tabA toxin-antitoxin biofilm protein TabA low > 79
Escherichia coli ECRC102 0.67 NIAGMN_22440 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.37 NIAGMN_09695 tabA toxin-antitoxin biofilm protein TabA low > 80
Escherichia coli ECRC101 0.67 MCAODC_20445 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.37 MCAODC_02350 tabA toxin-antitoxin biofilm protein TabA low > 87
Escherichia coli Nissle 1917 0.67 ECOLIN_RS11965 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.35 ECOLIN_RS24660 YhcH/YjgK/YiaL family protein — —
Dickeya dianthicola ME23 0.67 DZA65_RS10035 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.33 DZA65_RS01975 YhcH/YjgK/YiaL family protein — —
Klebsiella pneumoniae MKP103 0.67 KDGMDA_26115 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 0.35 KDGMDA_11470 YhcH/YjgK/YiaL family protein low > 94
Escherichia coli BW25113 0.67 b2024 hisA N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) 0.37 b4252 yjgK orf, hypothetical protein (VIMSS) low > 76
Klebsiella pneumoniae MRSN742743 0.67 GJGHJB_01686 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 0.35 GJGHJB_04485 nanQ Protein YjgK linked to biofilm formation low > 83
Dickeya dadantii 3937 0.67 DDA3937_RS09715 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.36 DDA3937_RS01930 YhcH/YjgK/YiaL family protein low > 74
Enterobacter asburiae PDN3 0.67 EX28DRAFT_0535 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) 0.36 EX28DRAFT_3453 YhcH/YjgK/YiaL family protein low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_03006 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.37 MPMX20_00550 Toxin-antitoxin biofilm protein TabA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF3908 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) 0.33 GFF939 Protein yjgK low > 78
Rahnella sp. WP5 0.66 EX31_RS11460 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.34 EX31_RS12815 YhcH/YjgK/YiaL family protein low > 89
Klebsiella michiganensis M5al 0.66 BWI76_RS18945 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase 0.37 BWI76_RS03005 hypothetical protein — —
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13516_RS07455 hisA 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.25 PagCFBP13516_RS00025 NanQ anomerase/TabA/YiaL family protein low > 80

Not shown: 63 genomes with orthologs for CSW01_05770 only; 0 genomes with orthologs for CSW01_07815 only