Conservation of cofitness between CSW01_10575 and CSW01_04655 in Vibrio cholerae E7946 ATCC 55056

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10575 endonuclease SmrB 1.0 CSW01_04655 HTH-type transcriptional regulator TreR 0.58 8
Rahnella sp. WP5 0.54 EX31_RS19695 endonuclease SmrB 0.44 EX31_RS08380 HTH-type transcriptional regulator TreR low > 89
Klebsiella pneumoniae MKP103 0.54 KDGMDA_27280 endonuclease SmrB 0.44 KDGMDA_11440 trehalose operon repressor TreR low > 94
Klebsiella pneumoniae MRSN742743 0.54 GJGHJB_01446 smrB endonuclease SmrB 0.44 GJGHJB_04490 treR trehalose operon repressor TreR low > 83
Klebsiella michiganensis M5al 0.54 BWI76_RS20445 endonuclease SmrB 0.44 BWI76_RS02970 trehalose operon repressor — —
Serratia liquefaciens MT49 0.53 IAI46_18035 endonuclease SmrB 0.45 IAI46_02220 HTH-type transcriptional regulator TreR low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_01374 Endonuclease MutS2 0.43 OHPLBJKB_03794 HTH-type transcriptional regulator TreR low > 74
Escherichia coli BW25113 0.53 b2331 yfcN hypothetical protein (NCBI) 0.43 b4241 treR trehalose repressor (NCBI) low > 76
Escherichia coli Nissle 1917 0.53 ECOLIN_RS13500 endonuclease SmrB 0.43 ECOLIN_RS24605 trehalose operon repressor TreR low > 55
Escherichia fergusonii Becca 0.53 EFB2_01527 Endonuclease MutS2 0.43 EFB2_04292 HTH-type transcriptional regulator TreR low > 86
Escherichia coli ECRC62 0.53 BNILDI_13160 smrB endonuclease SmrB 0.43 BNILDI_07355 treR trehalose operon repressor TreR low > 75
Escherichia coli BL21 0.53 ECD_02256 putative DNA endonuclease 0.43 ECD_04109 trehalose 6-phosphate-inducible trehalose regulon transcriptional repressor low > 61
Escherichia coli ECOR27 0.53 NOLOHH_14240 smrB endonuclease SmrB 0.43 NOLOHH_04155 treR trehalose operon repressor TreR low > 75
Escherichia coli ECOR38 0.53 HEPCGN_21810 smrB endonuclease SmrB 0.43 HEPCGN_10085 treR trehalose operon repressor TreR low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF1952 FIG001674: hypothetical protein 0.42 GFF924 Trehalose operon transcriptional repressor 0.40 75
Enterobacter asburiae PDN3 0.53 EX28DRAFT_0273 Uncharacterized protein conserved in bacteria 0.44 EX28DRAFT_3440 trehalose operon repressor, proteobacterial low > 76
Enterobacter sp. TBS_079 0.52 MPMX20_03266 Endonuclease MutS2 0.44 MPMX20_00539 HTH-type transcriptional regulator TreR low > 85
Escherichia coli ECRC99 0.51 KEDOAH_05590 smrB endonuclease SmrB 0.43 KEDOAH_16265 treR trehalose operon repressor TreR — —
Escherichia coli ECRC101 0.51 MCAODC_13645 smrB endonuclease SmrB 0.43 MCAODC_02395 treR trehalose operon repressor TreR low > 87
Escherichia coli ECRC100 0.51 OKFHMN_22605 smrB endonuclease SmrB 0.43 OKFHMN_11890 treR trehalose operon repressor TreR low > 79
Escherichia coli ECRC102 0.51 NIAGMN_20380 smrB endonuclease SmrB 0.43 NIAGMN_09740 treR trehalose operon repressor TreR low > 80
Escherichia coli ECRC98 0.51 JDDGAC_26565 smrB endonuclease SmrB 0.43 JDDGAC_15530 treR trehalose operon repressor TreR low > 87

Not shown: 14 genomes with orthologs for CSW01_10575 only; 0 genomes with orthologs for CSW01_04655 only