Conservation of cofitness between CSW01_04660 and CSW01_03155 in Vibrio cholerae E7946 ATCC 55056

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04660 PTS trehalose transporter subunit IIBC 1.0 CSW01_03155 RNA polymerase-binding transcription factor DksA 0.75 13
Rahnella sp. WP5 0.72 EX31_RS08385 PTS trehalose transporter subunit IIBC 0.86 EX31_RS03250 RNA polymerase-binding protein DksA low > 89
Enterobacter sp. TBS_079 0.72 MPMX20_00538 PTS system trehalose-specific EIIBC component 0.86 MPMX20_00831 RNA polymerase-binding transcription factor DksA low > 85
Enterobacter asburiae PDN3 0.72 EX28DRAFT_3439 PTS system, trehalose-specific IIBC component 0.86 EX28DRAFT_3734 transcriptional regulator, TraR/DksA family — —
Pectobacterium carotovorum WPP14 0.72 HER17_RS07200 PTS trehalose transporter subunit IIBC 0.83 HER17_RS05580 RNA polymerase-binding protein DksA low > 75
Klebsiella michiganensis M5al 0.71 BWI76_RS02965 PTS trehalose transporter subunit IIBC 0.84 BWI76_RS05015 transcriptional regulator low > 92
Escherichia coli ECRC62 0.70 BNILDI_07350 treB PTS trehalose transporter subunit IIBC 0.86 BNILDI_08980 dksA RNA polymerase-binding protein DksA 0.75 19
Escherichia coli BL21 0.70 ECD_04108 trehalose-specific PTS enzyme: IIB and IIC component 0.86 ECD_00144 transcriptional regulator of rRNA transcription; DnaK suppressor protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_03795 PTS system trehalose-specific EIIBC component 0.86 OHPLBJKB_03517 RNA polymerase-binding transcription factor DksA low > 73
Serratia liquefaciens MT49 0.68 IAI46_02155 PTS trehalose transporter subunit IIBC 0.86 IAI46_21210 RNA polymerase-binding protein DksA low > 86
Escherichia coli ECRC102 0.68 NIAGMN_09745 treB PTS trehalose transporter subunit IIBC 0.86 NIAGMN_08195 dksA RNA polymerase-binding protein DksA — —
Escherichia coli ECRC101 0.68 MCAODC_02400 treB PTS trehalose transporter subunit IIBC 0.86 MCAODC_00860 dksA RNA polymerase-binding protein DksA 0.65 30
Escherichia coli ECRC98 0.68 JDDGAC_15535 treB PTS trehalose transporter subunit IIBC 0.86 JDDGAC_13940 dksA RNA polymerase-binding protein DksA 0.76 16
Escherichia coli ECOR27 0.68 NOLOHH_04160 treB PTS trehalose transporter subunit IIBC 0.86 NOLOHH_02690 dksA RNA polymerase-binding protein DksA low > 75
Escherichia coli ECRC100 0.68 OKFHMN_11895 treB PTS trehalose transporter subunit IIBC 0.86 OKFHMN_10345 dksA RNA polymerase-binding protein DksA low > 80
Escherichia fergusonii Becca 0.68 EFB2_04293 PTS system trehalose-specific EIIBC component 0.86 EFB2_03899 RNA polymerase-binding transcription factor DksA low > 86
Escherichia coli ECOR38 0.68 HEPCGN_10090 treB PTS trehalose transporter subunit IIBC 0.86 HEPCGN_08295 dksA RNA polymerase-binding protein DksA low > 87
Escherichia coli Nissle 1917 0.68 ECOLIN_RS24600 PTS trehalose transporter subunit IIBC 0.86 ECOLIN_RS00815 RNA polymerase-binding protein DksA — —
Escherichia coli ECRC99 0.68 KEDOAH_16260 treB PTS trehalose transporter subunit IIBC 0.86 KEDOAH_17810 dksA RNA polymerase-binding protein DksA — —
Escherichia coli BW25113 0.68 b4240 treB fused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component (NCBI) 0.86 b0145 dksA DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) low > 76

Not shown: 0 genomes with orthologs for CSW01_04660 only; 47 genomes with orthologs for CSW01_03155 only