Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Klebsiella michiganensis M5al | 1.0 | BWI76_RS18000 | | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 1.0 | BWI76_RS01115 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | 0.50 | 5 |
Escherichia coli ECOR38 | 0.78 | HEPCGN_04840 | rsmF | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.92 | HEPCGN_13255 | rffA | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 87 |
Escherichia coli ECRC101 | 0.78 | MCAODC_18965 | rsmF | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.92 | MCAODC_05050 | rffA | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 87 |
Escherichia coli ECRC100 | 0.78 | OKFHMN_26440 | rsmF | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.92 | OKFHMN_14545 | rffA | dTDP-4-amino-4,6-dideoxygalactose transaminase | — | — |
Escherichia coli ECRC98 | 0.78 | JDDGAC_01015 | rsmF | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.92 | JDDGAC_18170 | rffA | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 86 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.78 | OHPLBJKB_01896 | | Ribosomal RNA small subunit methyltransferase F | 0.92 | OHPLBJKB_04263 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 73 |
Escherichia coli ECRC99 | 0.78 | KEDOAH_01665 | rsmF | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.92 | KEDOAH_13605 | rffA | dTDP-4-amino-4,6-dideoxygalactose transaminase | — | — |
Escherichia coli ECRC102 | 0.78 | NIAGMN_01620 | rsmF | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.92 | NIAGMN_12300 | rffA | dTDP-4-amino-4,6-dideoxygalactose transaminase | — | — |
Escherichia coli ECOR27 | 0.78 | NOLOHH_16950 | rsmF | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.92 | NOLOHH_06680 | rffA | dTDP-4-amino-4,6-dideoxygalactose transaminase | — | — |
Escherichia fergusonii Becca | 0.78 | EFB2_02166 | | Ribosomal RNA small subunit methyltransferase F | 0.93 | EFB2_04848 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 86 |
Escherichia coli BL21 | 0.78 | ECD_01806 | | 16S rRNA m(5)C1407 methyltransferase, SAM-dependent | 0.92 | ECD_03669 | | TDP-4-oxo-6-deoxy-D-glucose transaminase | — | — |
Enterobacter asburiae PDN3 | 0.77 | EX28DRAFT_0721 | | NOL1/NOP2/sun family putative RNA methylase | 0.91 | EX28DRAFT_4459 | | TDP-4-keto-6-deoxy-D-glucose transaminase | low | > 76 |
Escherichia coli BW25113 | 0.77 | b1835 | yebU | putative nucleolar proteins (VIMSS) | 0.92 | b3791 | rffA | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | low | > 76 |
Escherichia coli ECRC62 | 0.77 | BNILDI_15745 | rsmF | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.92 | BNILDI_04845 | rffA | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 75 |
Escherichia coli Nissle 1917 | 0.77 | ECOLIN_RS10215 | | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.92 | ECOLIN_RS21760 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.76 | GFF2850 | | Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) | 0.89 | GFF2882 | | Lipopolysaccharide biosynthesis protein RffA | low | > 78 |
Enterobacter sp. TBS_079 | 0.76 | MPMX20_02742 | | Ribosomal RNA small subunit methyltransferase F | 0.91 | MPMX20_04484 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | 0.33 | 49 |
Serratia liquefaciens MT49 | 0.68 | IAI46_10775 | | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.86 | IAI46_00625 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 86 |
Pantoea sp. MT58 | 0.68 | IAI47_08680 | | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.88 | IAI47_18485 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 76 |
Rahnella sp. WP5 | 0.65 | EX31_RS24855 | | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.82 | EX31_RS15080 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 89 |
Pectobacterium carotovorum WPP14 | 0.64 | HER17_RS11715 | | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.84 | HER17_RS01175 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 75 |
Dickeya dadantii 3937 | 0.63 | DDA3937_RS11990 | | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.76 | DDA3937_RS20040 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 74 |
Dickeya dianthicola 67-19 | 0.62 | HGI48_RS12080 | | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.75 | HGI48_RS20185 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 71 |
Dickeya dianthicola ME23 | 0.62 | DZA65_RS12530 | | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | 0.75 | DZA65_RS21230 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 75 |
Not shown: 15 genomes with orthologs for BWI76_RS18000 only; 6 genomes with orthologs for BWI76_RS01115 only