Conservation of cofitness between BNILDI_15690 and BNILDI_06970 in Escherichia coli ECRC62

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_15690 exoX exodeoxyribonuclease X 1.0 BNILDI_06970 hfq RNA chaperone Hfq 0.86 15
Escherichia coli ECOR27 0.99 NOLOHH_16895 exoX exodeoxyribonuclease X 1.00 NOLOHH_04520 hfq RNA chaperone Hfq low > 75
Escherichia fergusonii Becca 0.99 EFB2_02100 Exodeoxyribonuclease 10 1.00 EFB2_04363 RNA-binding protein Hfq low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS10265 exodeoxyribonuclease X 1.00 ECOLIN_RS24230 RNA chaperone Hfq — —
Escherichia coli BW25113 0.99 b1844 exoX exodeoxyribonuclease X (NCBI) 1.00 b4172 hfq RNA-binding protein Hfq (NCBI) low > 76
Escherichia coli ECOR38 0.99 HEPCGN_04785 exoX exodeoxyribonuclease X 1.00 HEPCGN_10485 hfq RNA chaperone Hfq low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01887 Exodeoxyribonuclease 10 1.00 OHPLBJKB_03870 RNA-binding protein Hfq low > 73
Escherichia coli ECRC100 0.99 OKFHMN_26385 exoX exodeoxyribonuclease X 1.00 OKFHMN_12255 hfq RNA chaperone Hfq low > 80
Escherichia coli BL21 0.99 ECD_01815 exodeoxyribonuclease 10; DNA exonuclease X 1.00 ECD_04039 global sRNA chaperone; HF-I, host factor for RNA phage Q beta replication low > 61
Escherichia coli ECRC99 0.99 KEDOAH_01720 exoX exodeoxyribonuclease X 1.00 KEDOAH_15900 hfq RNA chaperone Hfq — —
Escherichia coli ECRC102 0.99 NIAGMN_01675 exoX exodeoxyribonuclease X 1.00 NIAGMN_10105 hfq RNA chaperone Hfq — —
Escherichia coli ECRC98 0.99 JDDGAC_00960 exoX exodeoxyribonuclease X 1.00 JDDGAC_15895 hfq RNA chaperone Hfq low > 86
Escherichia coli ECRC101 0.98 MCAODC_19020 exoX exodeoxyribonuclease X 1.00 MCAODC_02770 hfq RNA chaperone Hfq low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF1623 Exodeoxyribonuclease X (EC 3.1.11.-) 0.96 GFF825 RNA-binding protein Hfq low > 78
Enterobacter sp. TBS_079 0.89 MPMX20_02751 Exodeoxyribonuclease 10 0.91 MPMX20_00453 RNA-binding protein Hfq low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0710 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 0.92 EX28DRAFT_3369 RNA chaperone Hfq low > 76
Klebsiella michiganensis M5al 0.88 BWI76_RS18070 DNA polymerase III subunit epsilon 0.90 BWI76_RS02535 RNA-binding protein Hfq — —
Rahnella sp. WP5 0.77 EX31_RS00350 exodeoxyribonuclease X 0.84 EX31_RS08820 RNA chaperone Hfq low > 89
Erwinia tracheiphila SCR3 0.63 LU632_RS13315 exoX exodeoxyribonuclease X 0.86 LU632_RS02055 hfq RNA chaperone Hfq — —
Pantoea sp. MT58 0.62 IAI47_08520 exodeoxyribonuclease X 0.75 IAI47_02590 RNA chaperone Hfq low > 76
Serratia liquefaciens MT49 0.60 IAI46_09980 exodeoxyribonuclease X 0.81 IAI46_01625 RNA chaperone Hfq low > 86

Not shown: 4 genomes with orthologs for BNILDI_15690 only; 13 genomes with orthologs for BNILDI_06970 only