Conservation of cofitness between BNILDI_15690 and BNILDI_06330 in Escherichia coli ECRC62

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_15690 exoX exodeoxyribonuclease X 1.0 BNILDI_06330 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.84 19
Escherichia fergusonii Becca 0.99 EFB2_02100 Exodeoxyribonuclease 10 0.92 EFB2_04556 tRNA-dihydrouridine(20/20a) synthase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS10265 exodeoxyribonuclease X 0.92 ECOLIN_RS23355 tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECOR27 0.99 NOLOHH_16895 exoX exodeoxyribonuclease X 1.00 NOLOHH_05195 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 75
Escherichia coli ECOR38 0.99 HEPCGN_04785 exoX exodeoxyribonuclease X 1.00 HEPCGN_11560 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 87
Escherichia coli BW25113 0.99 b1844 exoX exodeoxyribonuclease X (NCBI) 0.96 b4049 dusA tRNA-dihydrouridine synthase A (RefSeq) low > 76
Escherichia coli ECRC99 0.99 KEDOAH_01720 exoX exodeoxyribonuclease X 0.98 KEDOAH_15205 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECRC100 0.99 OKFHMN_26385 exoX exodeoxyribonuclease X 0.98 OKFHMN_12945 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 80
Escherichia coli ECRC98 0.99 JDDGAC_00960 exoX exodeoxyribonuclease X 0.98 JDDGAC_16580 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 86
Escherichia coli BL21 0.99 ECD_01815 exodeoxyribonuclease 10; DNA exonuclease X 1.00 ECD_03921 tRNA-dihydrouridine synthase A low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01887 Exodeoxyribonuclease 10 1.00 OHPLBJKB_03994 tRNA-dihydrouridine(20/20a) synthase low > 73
Escherichia coli ECRC102 0.99 NIAGMN_01675 exoX exodeoxyribonuclease X 1.00 NIAGMN_10790 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECRC101 0.98 MCAODC_19020 exoX exodeoxyribonuclease X 0.97 MCAODC_03455 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF1623 Exodeoxyribonuclease X (EC 3.1.11.-) 0.89 GFF1418 tRNA dihydrouridine synthase A (EC 1.-.-.-) low > 78
Enterobacter sp. TBS_079 0.89 MPMX20_02751 Exodeoxyribonuclease 10 0.88 MPMX20_00265 tRNA-dihydrouridine(20/20a) synthase low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0710 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 0.88 EX28DRAFT_4263 tRNA dihydrouridine synthase A low > 76
Klebsiella michiganensis M5al 0.88 BWI76_RS18070 DNA polymerase III subunit epsilon 0.88 BWI76_RS01900 tRNA-dihydrouridine synthase A low > 92
Rahnella sp. WP5 0.77 EX31_RS00350 exodeoxyribonuclease X 0.76 EX31_RS11865 tRNA dihydrouridine(20/20a) synthase DusA low > 89
Erwinia tracheiphila SCR3 0.63 LU632_RS13315 exoX exodeoxyribonuclease X 0.73 LU632_RS23765 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 74
Pantoea sp. MT58 0.62 IAI47_08520 exodeoxyribonuclease X 0.79 IAI47_17865 tRNA dihydrouridine(20/20a) synthase DusA low > 76
Serratia liquefaciens MT49 0.60 IAI46_09980 exodeoxyribonuclease X 0.79 IAI46_22970 tRNA dihydrouridine(20/20a) synthase DusA low > 86
Bosea sp. OAE506 0.19 ABIE41_RS06580 exonuclease domain-containing protein 0.48 ABIE41_RS21285 tRNA dihydrouridine(20/20a) synthase DusA low > 77
Rhizobium sp. OAE497 0.17 ABIE40_RS30485 DNA polymerase III subunit epsilon 0.50 ABIE40_RS10895 tRNA dihydrouridine(20/20a) synthase DusA low > 107
Acinetobacter radioresistens SK82 0.16 MPMX26_02051 Exodeoxyribonuclease 10 0.50 MPMX26_00482 tRNA-dihydrouridine(20/20a) synthase low > 36

Not shown: 1 genomes with orthologs for BNILDI_15690 only; 60 genomes with orthologs for BNILDI_06330 only