Conservation of cofitness between BT4331 and BT2573 in Bacteroides thetaiotaomicron VPI-5482

21 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Bacteroides thetaiotaomicron VPI-5482	1.0	BT4331		conserved hypothetical protein (NCBI ptt file)	1.0	BT2573		glutamate/gamma-aminobutyrate anti-porter (NCBI ptt file)	0.57	5
Bacteroides ovatus ATCC 8483	0.97	BACOVA_05134		hypothetical protein	0.84	BACOVA_00116		putative glutamate/gamma-aminobutyrate antiporter	low	> 94
Bacteroides stercoris CC31F	0.87	HMPREF1181_RS05925		class I SAM-dependent rRNA methyltransferase	0.83	HMPREF1181_RS10715		amino acid permease	low	> 56
Phocaeicola dorei CL03T12C01	0.86	ABI39_RS18215		class I SAM-dependent rRNA methyltransferase	0.74	ABI39_RS20160		amino acid permease	low	> 72
Phocaeicola vulgatus CL09T03C04	0.84	HMPREF1058_RS05890		class I SAM-dependent rRNA methyltransferase	0.74	HMPREF1058_RS06395		amino acid permease	low	> 67
Parabacteroides merdae CL09T00C40	0.76	HMPREF1078_RS13685		class I SAM-dependent rRNA methyltransferase	0.81	HMPREF1078_RS06375		amino acid permease	low	> 61
Rahnella sp. WP5	0.32	EX31_RS17990		23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	0.07	EX31_RS05350		amino acid permease	low	> 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	0.32	GFF3258		LSU m5C1962 methyltransferase RlmI	0.20	GFF1924		Putative amino acid transporter	low	> 78
Escherichia coli ECRC101	0.32	MCAODC_24575	rlmI	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	0.18	MCAODC_16650	gadC	acid resistance gamma-aminobutyrate antiporter GadC	low	> 87
Escherichia coli ECRC99	0.32	KEDOAH_22550	rlmI	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	0.18	KEDOAH_27150	gadC	acid resistance gamma-aminobutyrate antiporter GadC	—	—
Escherichia coli ECRC100	0.32	OKFHMN_05185	rlmI	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	0.18	OKFHMN_01290	gadC	acid resistance gamma-aminobutyrate antiporter GadC	—	—
Escherichia coli BW25113	0.32	b0967	yccW	predicted methyltransferase (RefSeq)	0.18	b1492	gadC	predicted glutamate:gamma-aminobutyric acid antiporter (NCBI)	low	> 76
Escherichia coli ECRC62	0.32	BNILDI_19905	rlmI	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	0.18	BNILDI_17420	gadC	acid resistance gamma-aminobutyrate antiporter GadC	low	> 75
Escherichia coli ECRC102	0.32	NIAGMN_02905	rlmI	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	0.18	NIAGMN_25420	gadC	acid resistance gamma-aminobutyrate antiporter GadC	—	—
Escherichia coli ECRC98	0.32	JDDGAC_08795	rlmI	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	0.18	JDDGAC_03780	gadC	acid resistance gamma-aminobutyrate antiporter GadC	low	> 86
Escherichia coli BL21	0.32	ECD_00971		23S rRNA m(5)C1962 methyltransferase, SAM-dependent	0.18	ECD_01450		glutamate:gamma-aminobutyric acid antiporter	—	—
Escherichia coli ECOR27	0.32	NOLOHH_21740	rlmI	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	0.18	NOLOHH_18930	gadC	acid resistance gamma-aminobutyrate antiporter GadC	low	> 75
Escherichia coli HS(pFamp)R (ATCC 700891)	0.32	OHPLBJKB_02699		Ribosomal RNA large subunit methyltransferase I	0.18	OHPLBJKB_02225		putative glutamate/gamma-aminobutyrate antiporter	low	> 73
Escherichia coli Nissle 1917	0.32	ECOLIN_RS05085		23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	0.18	ECOLIN_RS08560		acid resistance gamma-aminobutyrate antiporter GadC	—	—
Escherichia coli ECOR38	0.32	HEPCGN_23335	rlmI	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	0.18	HEPCGN_26510	gadC	acid resistance gamma-aminobutyrate antiporter GadC	low	> 87
Escherichia fergusonii Becca	0.32	EFB2_03104		Ribosomal RNA large subunit methyltransferase I	0.18	EFB2_02506		putative glutamate/gamma-aminobutyrate antiporter	low	> 86
Fusobacterium nucleatum SB010	0.23	HUW76_04950		class I SAM-dependent rRNA methyltransferase	0.30	HUW76_05085		amino acid permease	low	> 35

Not shown: 59 genomes with orthologs for BT4331 only; 0 genomes with orthologs for BT2573 only