Conservation of cofitness between BT3260 and BT2573 in Bacteroides thetaiotaomicron VPI-5482

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT3260 DNA polymerase I (NCBI ptt file) 1.0 BT2573 glutamate/gamma-aminobutyrate anti-porter (NCBI ptt file) 0.47 18
Bacteroides ovatus ATCC 8483 0.93 BACOVA_01357 DNA-directed DNA polymerase 0.84 BACOVA_00116 putative glutamate/gamma-aminobutyrate antiporter low > 94
Bacteroides stercoris CC31F 0.83 HMPREF1181_RS02070 DNA polymerase I 0.83 HMPREF1181_RS10715 amino acid permease low > 56
Phocaeicola vulgatus CL09T03C04 0.79 HMPREF1058_RS11500 DNA polymerase I 0.74 HMPREF1058_RS06395 amino acid permease low > 67
Phocaeicola dorei CL03T12C01 0.79 ABI39_RS05440 DNA polymerase I 0.74 ABI39_RS20160 amino acid permease — —
Parabacteroides merdae CL09T00C40 0.64 HMPREF1078_RS06335 DNA polymerase I 0.81 HMPREF1078_RS06375 amino acid permease low > 61
Escherichia coli ECRC62 0.37 BNILDI_05250 polA DNA polymerase I 0.18 BNILDI_17420 gadC acid resistance gamma-aminobutyrate antiporter GadC — —
Escherichia coli ECRC102 0.37 NIAGMN_11905 polA DNA polymerase I 0.18 NIAGMN_25420 gadC acid resistance gamma-aminobutyrate antiporter GadC — —
Escherichia coli ECRC98 0.37 JDDGAC_17775 polA DNA polymerase I 0.18 JDDGAC_03780 gadC acid resistance gamma-aminobutyrate antiporter GadC — —
Escherichia coli ECRC101 0.37 MCAODC_04650 polA DNA polymerase I 0.18 MCAODC_16650 gadC acid resistance gamma-aminobutyrate antiporter GadC — —
Escherichia coli ECOR27 0.37 NOLOHH_06280 polA DNA polymerase I 0.18 NOLOHH_18930 gadC acid resistance gamma-aminobutyrate antiporter GadC — —
Escherichia coli ECRC99 0.37 KEDOAH_14000 polA DNA polymerase I 0.18 KEDOAH_27150 gadC acid resistance gamma-aminobutyrate antiporter GadC — —
Escherichia coli ECRC101 0.37 OKFHMN_14150 polA DNA polymerase I 0.18 OKFHMN_01290 gadC acid resistance gamma-aminobutyrate antiporter GadC — —
Escherichia coli BL21 0.37 ECD_03749 5 0.18 ECD_01450 glutamate:gamma-aminobutyric acid antiporter — —
Escherichia coli BW25113 0.37 b3863 polA DNA polymerase I (NCBI) 0.18 b1492 gadC predicted glutamate:gamma-aminobutyric acid antiporter (NCBI) low > 76
Escherichia fergusonii Becca 0.37 EFB2_04753 DNA polymerase I 0.18 EFB2_02506 putative glutamate/gamma-aminobutyrate antiporter — —
Escherichia coli ECOR38 0.37 HEPCGN_12785 polA DNA polymerase I 0.18 HEPCGN_26510 gadC acid resistance gamma-aminobutyrate antiporter GadC — —
Escherichia coli Nissle 1917 0.37 ECOLIN_RS22270 DNA polymerase I 0.18 ECOLIN_RS08560 acid resistance gamma-aminobutyrate antiporter GadC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_04189 DNA polymerase I 0.18 OHPLBJKB_02225 putative glutamate/gamma-aminobutyrate antiporter — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF2216 DNA polymerase I (EC 2.7.7.7) 0.20 GFF1924 Putative amino acid transporter low > 78
Rahnella sp. WP5 0.35 EX31_RS15905 DNA polymerase I 0.07 EX31_RS05350 amino acid permease low > 89
Fusobacterium nucleatum SB010 0.24 HUW76_04385 DNA polymerase I 0.30 HUW76_05085 amino acid permease low > 35

Not shown: 79 genomes with orthologs for BT3260 only; 0 genomes with orthologs for BT2573 only