Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BW25113 | 1.0 | b3365 | nirB | nitrite reductase, large subunit, NAD(P)H-binding (NCBI) | 1.0 | b4471 | tdcG | L-serine dehydratase 3 (NCBI) | 0.31 | 4 |
Escherichia coli BL21 | 1.00 | ECD_03216 | | nitrite reductase, large subunit, NAD(P)H-binding | 1.00 | ECD_02979 | | L-serine dehydratase 3, anaerobic | low | > 60 |
Escherichia coli ECRC101 | 1.00 | MCAODC_07725 | nirB | NADPH-nitrite reductase large subunit | 0.99 | MCAODC_08940 | tdcG | L-serine ammonia-lyase | — | — |
Escherichia coli ECRC62 | 1.00 | BNILDI_02525 | nirB | NADPH-nitrite reductase large subunit | 1.00 | BNILDI_01320 | tdcG | L-serine ammonia-lyase | — | — |
Escherichia coli ECRC98 | 1.00 | JDDGAC_20825 | nirB | NADPH-nitrite reductase large subunit | 0.99 | JDDGAC_22060 | tdcG | L-serine ammonia-lyase | — | — |
Escherichia coli ECOR27 | 1.00 | NOLOHH_08995 | nirB | NADPH-nitrite reductase large subunit | 1.00 | NOLOHH_10205 | tdcG | L-serine ammonia-lyase | low | > 57 |
Escherichia coli ECRC101 | 1.00 | OKFHMN_17195 | nirB | NADPH-nitrite reductase large subunit | 0.99 | OKFHMN_18425 | tdcG | L-serine ammonia-lyase | — | — |
Escherichia coli ECRC99 | 1.00 | KEDOAH_10945 | nirB | NADPH-nitrite reductase large subunit | 0.99 | KEDOAH_09720 | tdcG | L-serine ammonia-lyase | — | — |
Escherichia coli ECRC102 | 1.00 | NIAGMN_14965 | nirB | NADPH-nitrite reductase large subunit | 0.99 | NIAGMN_16190 | tdcG | L-serine ammonia-lyase | — | — |
Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS19270 | | NADPH-nitrite reductase large subunit | 0.99 | ECOLIN_RS17915 | | L-serine ammonia-lyase | low | > 52 |
Escherichia coli ECOR38 | 1.00 | HEPCGN_16025 | nirB | NADPH-nitrite reductase large subunit | 1.00 | HEPCGN_17260 | tdcG | L-serine ammonia-lyase | low | > 85 |
Escherichia fergusonii Becca | 1.00 | EFB2_00457 | | Nitrite reductase [NAD(P)H] | 0.99 | EFB2_00702 | | L-serine dehydratase TdcG | low | > 86 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00337 | | Nitrite reductase [NAD(P)H] | 1.00 | OHPLBJKB_00588 | | L-serine dehydratase TdcG | low | > 73 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.93 | GFF3704 | | Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) | 0.87 | GFF3206 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | low | > 78 |
Dyella japonica UNC79MFTsu3.2 | 0.60 | ABZR86_RS03855 | | Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) | 0.52 | ABZR86_RS19060 | | L-serine ammonia-lyase | low | > 74 |
Pseudomonas stutzeri RCH2 | 0.56 | Psest_2406 | | nitrite reductase [NAD(P)H], large subunit | 0.51 | Psest_0784 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | low | > 67 |
Pseudomonas putida KT2440 | 0.56 | PP_1705 | | nitrite reductase [NAD(P)H] large subunit | 0.50 | PP_0987 | | L-serine dehydratase | low | > 96 |
Azospirillum sp. SherDot2 | 0.30 | MPMX19_05926 | | Nitrite reductase [NAD(P)H] | 0.41 | MPMX19_04703 | | L-serine dehydratase TdcG | low | > 112 |
Sinorhizobium meliloti 1021 | 0.28 | SM_b20984 | | Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) | 0.41 | SMc01256 | | L-serine dehydratase | low | > 103 |
Rhizobium sp. OAE497 | 0.27 | ABIE40_RS25560 | | nitrite reductase large subunit NirB | 0.43 | ABIE40_RS09785 | | L-serine ammonia-lyase | low | > 107 |
Variovorax sp. SCN45 | 0.26 | GFF4734 | | Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) | 0.46 | GFF3439 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | low | > 127 |
Xanthomonas campestris pv. campestris strain 8004 | 0.26 | Xcc-8004.2712.1 | | Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) | 0.53 | Xcc-8004.1601.1 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | low | > 74 |
Not shown: 47 genomes with orthologs for b3365 only; 12 genomes with orthologs for b4471 only