Conservation of cofitness between b3528 and b4124 in Escherichia coli BW25113

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3528 dctA C4 dicarboxylate/orotate:H+ symporter (DctA) (from data) 1.0 b4124 dcuR DNA-binding response regulator in two-component regulatory system with DcuS (NCBI) 0.85 1
Escherichia coli ECRC62 1.00 BNILDI_03395 dctA C4-dicarboxylate transporter DctC 1.00 BNILDI_06710 dcuR two-component system response regulator DcuR — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20180 C4-dicarboxylate transporter DctC 1.00 ECOLIN_RS23865 two-component system response regulator DcuR 0.71 47
Escherichia coli ECOR27 1.00 NOLOHH_08160 dctA C4-dicarboxylate transporter DctC 1.00 NOLOHH_04780 dcuR two-component system response regulator DcuR low > 57
Escherichia coli ECOR38 1.00 HEPCGN_15100 dctA C4-dicarboxylate transporter DctC 1.00 HEPCGN_11150 dcuR two-component system response regulator DcuR low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00174 Aerobic C4-dicarboxylate transport protein 1.00 OHPLBJKB_03920 Transcriptional regulatory protein DcuR low > 73
Escherichia coli ECRC101 1.00 OKFHMN_16195 dctA C4-dicarboxylate transporter DctC 1.00 OKFHMN_12515 dcuR two-component system response regulator DcuR — —
Escherichia coli ECRC99 1.00 KEDOAH_11955 dctA C4-dicarboxylate transporter DctC 1.00 KEDOAH_15650 dcuR two-component system response regulator DcuR — —
Escherichia coli ECRC98 1.00 JDDGAC_19825 dctA C4-dicarboxylate transporter DctC 1.00 JDDGAC_16150 dcuR two-component system response regulator DcuR — —
Escherichia coli BL21 1.00 ECD_03376 C4-dicarboxylic acid, orotate and citrate transporter 1.00 ECD_03995 response regulator in two-component regulatory system with DcuS low > 60
Escherichia coli ECRC102 1.00 NIAGMN_13960 dctA C4-dicarboxylate transporter DctC 1.00 NIAGMN_10360 dcuR two-component system response regulator DcuR — —
Escherichia coli ECRC101 1.00 MCAODC_06710 dctA C4-dicarboxylate transporter DctC 1.00 MCAODC_03025 dcuR two-component system response regulator DcuR — —
Escherichia fergusonii Becca 1.00 EFB2_00280 Aerobic C4-dicarboxylate transport protein 1.00 EFB2_04459 Transcriptional regulatory protein DcuR low > 86
Klebsiella michiganensis M5al 0.93 BWI76_RS26760 C4-dicarboxylate transport protein DctA (from data) 0.69 BWI76_RS16090 two-component system response regulator DcuR low > 92
Enterobacter sp. TBS_079 0.93 MPMX20_04413 Aerobic C4-dicarboxylate transport protein 0.71 MPMX20_02962 Transcriptional regulatory protein DcuR low > 85
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4049 Na+/H+-dicarboxylate symporters 0.71 EX28DRAFT_0588 Response regulator of citrate/malate metabolism low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF495 Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate 0.89 GFF1480 Fumarate respiration transcriptional regulator DcuR low > 78
Rahnella sp. WP5 0.88 EX31_RS05445 dicarboxylate/amino acid:cation symporter 0.76 EX31_RS01180 two-component system response regulator DcuR low > 89
Serratia liquefaciens MT49 0.87 IAI46_00550 dicarboxylate/amino acid:cation symporter 0.55 IAI46_10075 two-component system response regulator DcuR low > 86
Pantoea sp. MT58 0.86 IAI47_18585 dicarboxylate/amino acid:cation symporter 0.74 IAI47_20415 two-component system response regulator DcuR 0.47 11
Dickeya dianthicola 67-19 0.85 HGI48_RS20835 dicarboxylate/amino acid:cation symporter 0.55 HGI48_RS20945 two-component system response regulator DcuR low > 71
Dickeya dianthicola ME23 0.85 DZA65_RS21850 dicarboxylate/amino acid:cation symporter 0.55 DZA65_RS21930 two-component system response regulator DcuR 0.69 11
Dickeya dadantii 3937 0.84 DDA3937_RS00555 dicarboxylate/amino acid:cation symporter 0.55 DDA3937_RS00450 two-component system response regulator DcuR 0.50 30
Pectobacterium carotovorum WPP14 0.84 HER17_RS00400 dicarboxylate/amino acid:cation symporter 0.57 HER17_RS00205 two-component system response regulator DcuR low > 75

Not shown: 48 genomes with orthologs for b3528 only; 1 genomes with orthologs for b4124 only