Conservation of cofitness between Rru_A2364 and Rru_A3731 in Rhodospirillum rubrum S1H

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A2364 Hemimethylated DNA-binding region (NCBI) 1.0 Rru_A3731 Transcriptional Regulator, GntR family (NCBI) 0.50 14
Caulobacter crescentus NA1000 0.65 CCNA_01685 hemimethylated DNA-binding protein yccV 0.19 CCNA_00928 GntR family transcriptional regulator low > 66
Caulobacter crescentus NA1000 Δfur 0.65 CCNA_01685 hemimethylated DNA-binding protein yccV 0.19 CCNA_00928 GntR family transcriptional regulator low > 67
Bosea sp. OAE506 0.64 ABIE41_RS15845 heat shock protein HspQ 0.22 ABIE41_RS07855 GntR family transcriptional regulator — —
Sinorhizobium meliloti 1021 0.63 SMc00949 hypothetical protein 0.18 SMa0065 GntR family transcriptional regulator low > 103
Agrobacterium fabrum C58 0.58 Atu8165 hypothetical protein 0.19 Atu3815 GntR family transcriptional regulator low > 89
Dickeya dadantii 3937 0.24 DDA3937_RS15200 heat shock protein HspQ 0.18 DDA3937_RS14985 GntR family transcriptional regulator low > 74
Pectobacterium carotovorum WPP14 0.23 HER17_RS08465 heat shock protein HspQ 0.21 HER17_RS01295 GntR family transcriptional regulator low > 75
Klebsiella michiganensis M5al 0.22 BWI76_RS10040 heat-shock protein HspQ 0.17 BWI76_RS15480 GntR family transcriptional regulator low > 92
Escherichia coli BL21 0.22 ECD_00970 heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein 0.16 ECD_01499 transcriptional repressor for rspAB — —
Escherichia fergusonii Becca 0.22 EFB2_03105 Heat shock protein HspQ 0.16 EFB2_02416 HTH-type transcriptional repressor RspR low > 86
Escherichia coli ECRC99 0.22 KEDOAH_22545 hspQ heat shock protein HspQ 0.16 KEDOAH_27420 ydfH DNA-binding transcriptional regulator YdfH — —
Escherichia coli ECRC98 0.22 JDDGAC_08800 hspQ heat shock protein HspQ 0.16 JDDGAC_03520 ydfH DNA-binding transcriptional regulator YdfH low > 86
Escherichia coli BW25113 0.22 b0966 hspQ DNA-binding protein, hemimethylated (RefSeq) 0.16 b1540 ydfH predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC101 0.22 MCAODC_24580 hspQ heat shock protein HspQ 0.16 MCAODC_16915 ydfH DNA-binding transcriptional regulator YdfH low > 87
Escherichia coli ECOR27 0.22 NOLOHH_21745 hspQ heat shock protein HspQ 0.16 NOLOHH_18635 ydfH DNA-binding transcriptional regulator YdfH — —
Escherichia coli ECOR38 0.22 HEPCGN_23330 hspQ heat shock protein HspQ 0.17 HEPCGN_26935 ydfH DNA-binding transcriptional regulator YdfH low > 87
Escherichia coli ECRC100 0.22 OKFHMN_05190 hspQ heat shock protein HspQ 0.16 OKFHMN_01010 ydfH DNA-binding transcriptional regulator YdfH — —
Escherichia coli ECRC102 0.22 NIAGMN_02910 hspQ heat shock protein HspQ 0.16 NIAGMN_25155 ydfH DNA-binding transcriptional regulator YdfH — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_02700 Heat shock protein HspQ 0.16 OHPLBJKB_02172 HTH-type transcriptional repressor RspR low > 73
Escherichia coli ECRC62 0.22 BNILDI_19910 hspQ heat shock protein HspQ 0.16 BNILDI_17125 ydfH DNA-binding transcriptional regulator YdfH low > 75
Escherichia coli Nissle 1917 0.22 ECOLIN_RS05080 heat shock protein HspQ 0.16 ECOLIN_RS08815 DNA-binding transcriptional regulator rspR — —

Not shown: 5 genomes with orthologs for Rru_A2364 only; 15 genomes with orthologs for Rru_A3731 only