Conservation of cofitness between Rru_A3641 and Rru_A1345 in Rhodospirillum rubrum S1H
20 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Rhodospirillum rubrum S1H | 1.0 | Rru_A3641 | | Ribonuclease PH (NCBI) | 1.0 | Rru_A1345 | | hypothetical protein (NCBI) | 0.55 | 20 |
Sinorhizobium meliloti 1021 | 0.67 | SMc01144 | | ribonuclease PH | 0.15 | SM_b20498 | | hypothetical protein | low | > 103 |
Agrobacterium fabrum C58 | 0.66 | Atu0327 | | ribonuclease PH | 0.15 | Atu3875 | | aldolase | — | — |
Variovorax sp. SCN45 | 0.57 | GFF2381 | | Ribonuclease PH (EC 2.7.7.56) | 0.14 | GFF4952 | | DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes | low | > 127 |
Escherichia coli BL21 | 0.56 | ECD_03500 | | ribonuclease PH | 0.16 | ECD_01474 | | putative autoinducer-2 (AI-2) aldolase | — | — |
Escherichia coli ECOR38 | 0.56 | HEPCGN_14410 | rph | ribonuclease PH | 0.16 | HEPCGN_26610 | lsrF | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | low | > 87 |
Escherichia coli ECRC101 | 0.56 | MCAODC_06100 | rph | ribonuclease PH | 0.16 | MCAODC_16775 | lsrF | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | low | > 87 |
Escherichia coli ECRC99 | 0.56 | KEDOAH_12555 | rph | ribonuclease PH | 0.16 | KEDOAH_27280 | lsrF | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | — | — |
Escherichia coli ECRC102 | 0.56 | NIAGMN_13350 | rph | ribonuclease PH | 0.16 | NIAGMN_25295 | lsrF | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.56 | OHPLBJKB_00059 | | Ribonuclease PH | 0.16 | OHPLBJKB_02202 | | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | low | > 73 |
Escherichia coli ECRC98 | 0.56 | JDDGAC_19215 | rph | ribonuclease PH | 0.16 | JDDGAC_03655 | lsrF | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | low | > 86 |
Escherichia coli ECOR27 | 0.56 | NOLOHH_07470 | rph | ribonuclease PH | 0.16 | NOLOHH_18800 | lsrF | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | low | > 75 |
Escherichia coli ECRC100 | 0.56 | OKFHMN_15590 | rph | ribonuclease PH | 0.16 | OKFHMN_01150 | lsrF | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | — | — |
Escherichia coli ECRC62 | 0.56 | BNILDI_04045 | rph | ribonuclease PH | 0.16 | BNILDI_17280 | lsrF | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | low | > 75 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.56 | GFF366 | | Ribonuclease PH (EC 2.7.7.56) | 0.16 | GFF2299 | | Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) | low | > 78 |
Enterobacter sp. TBS_079 | 0.55 | MPMX20_00092 | | Ribonuclease PH | 0.15 | MPMX20_03987 | | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | low | > 85 |
Enterobacter asburiae PDN3 | 0.55 | EX28DRAFT_3893 | | ribonuclease PH | 0.15 | EX28DRAFT_3145 | | DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes | low | > 76 |
Klebsiella michiganensis M5al | 0.55 | BWI76_RS27390 | | ribonuclease PH | 0.16 | BWI76_RS14880 | | putative fructose-bisphosphate aldolase, class 1 | low | > 92 |
Escherichia coli BW25113 | 0.53 | b3643 | rph | ribonuclease PH (NCBI) | 0.16 | b1517 | lsrF | hypothetical protein (NCBI) | low | > 76 |
Serratia liquefaciens MT49 | 0.53 | IAI46_24850 | | ribonuclease PH | 0.11 | IAI46_10085 | | aldolase | low | > 86 |
Rahnella sp. WP5 | 0.53 | EX31_RS14505 | | ribonuclease PH | 0.16 | EX31_RS09780 | | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | low | > 89 |
Not shown: 68 genomes with orthologs for Rru_A3641 only; 5 genomes with orthologs for Rru_A1345 only