Homologs of BT4643 from Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Bacteroides thetaiotaomicron VPI-5482 BT4643 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 100 100
o Bacteroides ovatus ATCC 8483 BACOVA_05457 RNA polymerase sigma-70 factor insig. 80 100
o Phocaeicola dorei CL03T12C01 ABI39_RS10155 RNA polymerase sigma-70 factor insig. 68 98
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS00770 RNA polymerase sigma-70 factor insig. 65 98
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00265 RNA polymerase sigma-70 factor insig. 40 95
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17460 RNA polymerase sigma-70 factor insig. 33 97
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS03570 RNA polymerase sigma-70 factor insig. 36 92
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3656 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 34 92
  Bacteroides ovatus ATCC 8483 BACOVA_02944 RNA polymerase sigma-70 factor insig. 32 93
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05690 RNA polymerase sigma-70 factor insig. 35 91
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11705 hypothetical protein insig. 31 94
  Bacteroides thetaiotaomicron VPI-5482 BT3277 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 33 98
  Phocaeicola dorei CL03T12C01 ABI39_RS00860 RNA polymerase sigma-70 factor insig. 34 94
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04080 RNA polymerase sigma-70 factor insig. 33 96
  Bacteroides ovatus ATCC 8483 BACOVA_01977 RNA polymerase sigma-70 factor insig. 31 96
  Bacteroides stercoris CC31F HMPREF1181_RS06050 RNA polymerase sigma-70 factor insig. 31 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12140 hypothetical protein insig. 37 95
  Bacteroides ovatus ATCC 8483 BACOVA_04866 RNA polymerase sigma-70 factor insig. 32 87
  Bacteroides ovatus ATCC 8483 BACOVA_05184 RNA polymerase sigma-70 factor insig. 32 96
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05575 RNA polymerase sigma-70 factor insig. 33 91
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06675 RNA polymerase sigma-70 factor insig. 34 85
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4534 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 30 95
  Bacteroides ovatus ATCC 8483 BACOVA_03283 RNA polymerase sigma-70 factor insig. 33 89
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4327 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 32 88
  Phocaeicola dorei CL03T12C01 ABI39_RS18115 RNA polymerase sigma-70 factor insig. 34 95
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12340 RNA polymerase sigma-70 factor cofit 33 91
  Phocaeicola dorei CL03T12C01 ABI39_RS08655 RNA polymerase sigma-70 factor insig. 32 98
  Bacteroides thetaiotaomicron VPI-5482 BT1877 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 31 97
  Bacteroides ovatus ATCC 8483 BACOVA_03594 RNA polymerase sigma-70 factor insig. 34 94
  Bacteroides ovatus ATCC 8483 BACOVA_05174 RNA polymerase sigma-70 factor insig. 34 95
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11490 RNA polymerase sigma-70 factor insig. 32 91
  Bacteroides thetaiotaomicron VPI-5482 BT4355 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 33 95
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13420 RNA polymerase sigma-70 factor insig. 31 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17775 hypothetical protein sig. 30 95
  Bacteroides thetaiotaomicron VPI-5482 BT4070 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 33 85
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06675 hypothetical protein insig. 30 97
  Bacteroides thetaiotaomicron VPI-5482 BT0966 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 29 95
  Bacteroides thetaiotaomicron VPI-5482 BT3993 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 31 86
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13360 RNA polymerase sigma-70 factor insig. 30 96
  Bacteroides ovatus ATCC 8483 BACOVA_04812 RNA polymerase sigma-70 factor insig. 30 87
  Bacteroides thetaiotaomicron VPI-5482 BT4705 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 33 89
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11515 RNA polymerase sigma-70 factor insig. 31 91
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2852 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 29 95
  Bacteroides thetaiotaomicron VPI-5482 BT1617 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 29 92
  Phocaeicola dorei CL03T12C01 ABI39_RS02030 RNA polymerase sigma-70 factor insig. 32 91
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2584 RNA polymerase sigma factor, sigma-70 family insig. 31 95
  Bacteroides ovatus ATCC 8483 BACOVA_00842 RNA polymerase sigma-70 factor insig. 30 98
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21040 RNA polymerase sigma-70 factor insig. 29 98
  Phocaeicola dorei CL03T12C01 ABI39_RS12275 RNA polymerase sigma-70 factor insig. 32 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02575 hypothetical protein insig. 29 89
  Bacteroides ovatus ATCC 8483 BACOVA_00098 RNA polymerase sigma-70 factor insig. 29 92
  Bacteroides ovatus ATCC 8483 BACOVA_02951 RNA polymerase sigma-70 factor insig. 31 97
  Phocaeicola dorei CL03T12C01 ABI39_RS00120 RNA polymerase sigma-70 factor insig. 33 96
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09605 RNA polymerase sigma-70 factor insig. 32 91
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16435 RNA polymerase sigma-70 factor strong 32 89
  Bacteroides ovatus ATCC 8483 BACOVA_05556 RNA polymerase sigma-70 factor insig. 31 90
  Bacteroides thetaiotaomicron VPI-5482 BT2198 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 32 89
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3924 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 27 94
  Bacteroides ovatus ATCC 8483 BACOVA_00771 RNA polymerase sigma-70 factor insig. 29 95
  Bacteroides stercoris CC31F HMPREF1181_RS01060 RNA polymerase sigma-70 factor insig. 26 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05630 RNA polymerase sigma-70 factor sig. 32 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20645 RNA polymerase subunit sigma-70 insig. 31 93
  Bacteroides ovatus ATCC 8483 BACOVA_02488 RNA polymerase sigma-70 factor insig. 30 93
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11925 RNA polymerase sigma-70 factor strong 30 93
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05665 RNA polymerase sigma-70 factor insig. 28 93
  Phocaeicola dorei CL03T12C01 ABI39_RS06270 RNA polymerase sigma-70 factor insig. 32 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10800 RNA polymerase sigma-70 factor insig. 32 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3527 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 31 91
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15195 RNA polymerase sigma-70 factor insig. 31 93
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2168 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 34 83
  Bacteroides thetaiotaomicron VPI-5482 BT4250 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 28 98
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18610 RNA polymerase sigma-70 factor insig. 30 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14245 RNA polymerase sigma-70 factor insig. 31 89
  Bacteroides thetaiotaomicron VPI-5482 BT0188 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 25 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10380 RNA polymerase subunit sigma-70 insig. 30 89
  Bacteroides thetaiotaomicron VPI-5482 BT3010 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 31 91
  Bacteroides ovatus ATCC 8483 BACOVA_03855 RNA polymerase sigma-70 factor insig. 30 87
  Bacteroides thetaiotaomicron VPI-5482 BT0752 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 30 93
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05780 RNA polymerase sigma-70 factor insig. 30 93
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02700 RNA polymerase sigma-70 factor insig. 29 91
  Phocaeicola dorei CL03T12C01 ABI39_RS10065 sigma-70 family RNA polymerase sigma factor insig. 31 86
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04750 RNA polymerase sigma-70 factor insig. 29 94
  Bacteroides ovatus ATCC 8483 BACOVA_01251 RNA polymerase sigma-70 factor sig. 28 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14445 sigma-70 family RNA polymerase sigma factor insig. 30 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02810 RNA polymerase sigma-70 factor insig. 25 92
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09005 RNA polymerase sigma-70 factor cofit 29 85
  Bacteroides ovatus ATCC 8483 BACOVA_04151 RNA polymerase sigma-70 factor insig. 31 92
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05735 RNA polymerase sigma-70 factor insig. 30 91
  Phocaeicola dorei CL03T12C01 ABI39_RS03325 RNA polymerase sigma-70 factor insig. 29 85
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05370 RNA polymerase subunit sigma-70 insig. 29 91
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13700 hypothetical protein insig. 28 96
  Bacteroides ovatus ATCC 8483 BACOVA_00154 RNA polymerase sigma-70 factor insig. 27 85
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1974 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 30 87
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 28 91
  Phocaeicola dorei CL03T12C01 ABI39_RS10885 sigma-70 family RNA polymerase sigma factor insig. 34 92
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09910 hypothetical protein insig. 29 88
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10785 RNA polymerase sigma-70 factor insig. 29 95
  Bacteroides thetaiotaomicron VPI-5482 BT1278 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 31 85
  Pseudomonas putida KT2440 PP_4608 RNA polymerase sigma-70 factor, ECF subfamily insig. 29 90
  Phocaeicola dorei CL03T12C01 ABI39_RS10300 RNA polymerase sigma-70 factor sig. 31 97