Conservation of cofitness between PP_4741 and PP_2148 in Pseudomonas putida KT2440

14 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4741 Type I restriction enzyme EcoEI M protein 1.0 PP_2148 transcription-repair coupling factor 0.19 4
Escherichia coli ECOR38 0.68 HEPCGN_09455 hsdM Type I restriction enzyme EcoEI methylase subunit 0.55 HEPCGN_24015 mfd transcription-repair coupling factor low > 87
Escherichia coli ECRC99 0.67 KEDOAH_16730 hsdM Type I restriction enzyme EcoEI methylase subunit 0.55 KEDOAH_24285 mfd transcription-repair coupling factor — —
Escherichia coli ECRC102 0.67 NIAGMN_09265 hsdM Type I restriction enzyme EcoEI methylase subunit 0.55 NIAGMN_24360 mfd transcription-repair coupling factor — —
Escherichia coli ECRC100 0.67 OKFHMN_11415 hsdM Type I restriction enzyme EcoEI methylase subunit 0.55 OKFHMN_03470 mfd transcription-repair coupling factor low > 80
Escherichia coli ECRC98 0.67 JDDGAC_15010 hsdM Type I restriction enzyme EcoEI methylase subunit 0.55 JDDGAC_07130 mfd transcription-repair coupling factor low > 86
Escherichia coli ECRC101 0.67 MCAODC_01930 hsdM Type I restriction enzyme EcoEI methylase subunit 0.55 MCAODC_22830 mfd transcription-repair coupling factor low > 87
Rhodanobacter sp. FW510-T8 0.61 OKGIIK_13995 Site-specific DNA-methyltransferase (adenine-specific) 0.54 OKGIIK_09105 mfd transcription-repair coupling factor low > 52
Castellaniella sp019104865 MT123 0.37 ABCV34_RS05465 class I SAM-dependent DNA methyltransferase 0.47 ABCV34_RS08660 transcription-repair coupling factor low > 48
Pseudomonas sp. RS175 0.18 PFR28_03897 Type I restriction enzyme EcoKI M protein 0.89 PFR28_01123 Transcription-repair-coupling factor low > 88
Shewanella oneidensis MR-1 0.17 SO4265 hsdM-2 type I restriction-modification system, M subunit (NCBI ptt file) 0.55 SO2255 mfd transcription-repair coupling factor (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.17 Shewana3_2027 N-6 DNA methylase (RefSeq) 0.55 Shewana3_2289 transcription-repair coupling factor (RefSeq) low > 73
Pseudomonas fluorescens FW300-N2E3 0.17 AO353_11435 SAM-dependent methyltransferase 0.89 AO353_00435 transcription-repair coupling factor low > 101
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF1001 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) 0.55 GFF3397 Transcription-repair coupling factor low > 78
Pseudomonas fluorescens GW456-L13 0.14 PfGW456L13_3109 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) 0.87 PfGW456L13_4027 Transcription-repair coupling factor low > 87

Not shown: 4 genomes with orthologs for PP_4741 only; 73 genomes with orthologs for PP_2148 only