Conservation of cofitness between HSERO_RS21710 and HSERO_RS17810 in Herbaspirillum seropedicae SmR1

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21710 antibiotic resistance protein MarC 1.0 HSERO_RS17810 glycosyl transferase 0.50 2
Pantoea sp. MT58 0.23 IAI47_16695 MarC family NAAT transporter 0.25 IAI47_00670 sugar glycosyltransferase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF2508 Multiple antibiotic resistance protein MarC 0.24 GFF384 UDP-glucose:(glucosyl)lipopolysaccharide alpha-1,3-glucosyltransferase WaaO (EC 2.4.1.-) 0.47 23
Escherichia coli Nissle 1917 0.21 ECOLIN_RS08725 NAAT family transporter MarC 0.23 ECOLIN_RS20685 lipopolysaccharide 3-alpha-galactosyltransferase — —
Escherichia coli ECRC99 0.21 KEDOAH_27345 marC NAAT family transporter MarC 0.19 KEDOAH_12475 rfaJ glucosyltransferase — —
Escherichia coli ECOR38 0.21 HEPCGN_26835 marC NAAT family transporter MarC 0.23 HEPCGN_14490 waaO lipopolysaccharide 3-alpha-galactosyltransferase low > 87
Escherichia coli ECRC62 0.21 BNILDI_17220 marC NAAT family transporter MarC 0.23 BNILDI_03970 waaO lipopolysaccharide 3-alpha-galactosyltransferase low > 75
Escherichia coli ECOR27 0.21 NOLOHH_18730 marC NAAT family transporter MarC 0.19 NOLOHH_07555 rfaJ glucosyltransferase low > 75
Escherichia coli BW25113 0.21 b1529 marC predicted transporter (NCBI) 0.18 b3627 rfaI UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) — —
Escherichia fergusonii Becca 0.21 EFB2_02432 hypothetical protein 0.23 EFB2_00184 hypothetical protein low > 86
Escherichia coli BL21 0.21 ECD_01486 UPF0056 family inner membrane protein 0.23 ECD_03486 UDP-glucose:(Glucosyl) LPS alpha1,3-glucosyltransferase WaaO low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_02190 hypothetical protein 0.23 OHPLBJKB_00073 hypothetical protein — —
Escherichia coli ECRC102 0.21 NIAGMN_25230 marC NAAT family transporter MarC 0.19 NIAGMN_13435 rfaJ glucosyltransferase — —
Escherichia coli ECRC101 0.21 MCAODC_16840 marC NAAT family transporter MarC 0.19 MCAODC_06185 rfaJ glucosyltransferase low > 87
Escherichia coli ECRC98 0.21 JDDGAC_03595 marC NAAT family transporter MarC 0.19 JDDGAC_19300 rfaJ glucosyltransferase low > 86
Escherichia coli ECRC100 0.21 OKFHMN_01085 marC NAAT family transporter MarC 0.19 OKFHMN_15675 rfaJ glucosyltransferase low > 80
Rahnella sp. WP5 0.18 EX31_RS14080 MarC family NAAT transporter 0.27 EX31_RS14415 sugar glycosyltransferase low > 89

Not shown: 73 genomes with orthologs for HSERO_RS21710 only; 0 genomes with orthologs for HSERO_RS17810 only