Conservation of cofitness between HSERO_RS08590 and HSERO_RS17810 in Herbaspirillum seropedicae SmR1

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS08590 pseudouridine synthase 1.0 HSERO_RS17810 glycosyl transferase 0.32 12
Escherichia coli ECRC98 0.26 JDDGAC_27320 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.19 JDDGAC_19300 rfaJ glucosyltransferase low > 86
Escherichia coli Nissle 1917 0.26 ECOLIN_RS12760 16S rRNA pseudouridine(516) synthase RsuA 0.23 ECOLIN_RS20685 lipopolysaccharide 3-alpha-galactosyltransferase — —
Escherichia coli ECRC99 0.26 KEDOAH_04825 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.19 KEDOAH_12475 rfaJ glucosyltransferase — —
Escherichia coli BL21 0.26 ECD_02113 16S rRNA pseudouridine(516) synthase 0.23 ECD_03486 UDP-glucose:(Glucosyl) LPS alpha1,3-glucosyltransferase WaaO low > 61
Escherichia coli ECOR38 0.26 HEPCGN_22625 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.23 HEPCGN_14490 waaO lipopolysaccharide 3-alpha-galactosyltransferase low > 87
Escherichia coli ECOR27 0.26 NOLOHH_14935 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.19 NOLOHH_07555 rfaJ glucosyltransferase low > 75
Escherichia fergusonii Becca 0.26 EFB2_01673 Ribosomal small subunit pseudouridine synthase A 0.23 EFB2_00184 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_01526 Ribosomal small subunit pseudouridine synthase A 0.23 OHPLBJKB_00073 hypothetical protein — —
Escherichia coli BW25113 0.26 b2183 rsuA 16S rRNA pseudouridylate 516 synthase (NCBI) 0.18 b3627 rfaI UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) low > 76
Escherichia coli ECRC102 0.26 NIAGMN_21125 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.19 NIAGMN_13435 rfaJ glucosyltransferase — —
Escherichia coli ECRC62 0.26 BNILDI_13855 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.23 BNILDI_03970 waaO lipopolysaccharide 3-alpha-galactosyltransferase low > 75
Escherichia coli ECRC100 0.26 OKFHMN_23360 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.19 OKFHMN_15675 rfaJ glucosyltransferase low > 80
Escherichia coli ECRC101 0.26 MCAODC_14410 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.19 MCAODC_06185 rfaJ glucosyltransferase low > 87
Pantoea sp. MT58 0.26 IAI47_06585 16S rRNA pseudouridine(516) synthase RsuA 0.25 IAI47_00670 sugar glycosyltransferase low > 76
Rahnella sp. WP5 0.26 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA 0.27 EX31_RS14415 sugar glycosyltransferase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.24 GFF384 UDP-glucose:(glucosyl)lipopolysaccharide alpha-1,3-glucosyltransferase WaaO (EC 2.4.1.-) low > 78

Not shown: 55 genomes with orthologs for HSERO_RS08590 only; 0 genomes with orthologs for HSERO_RS17810 only