Conservation of cofitness between HER17_RS05585 and HER17_RS19575 in Pectobacterium carotovorum WPP14

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS05585 DNA/RNA nuclease SfsA 1.0 HER17_RS19575 helix-turn-helix domain-containing protein 0.68 3
Serratia liquefaciens MT49 0.75 IAI46_21205 DNA/RNA nuclease SfsA 0.59 IAI46_22500 helix-turn-helix domain-containing protein
Escherichia coli Nissle 1917 0.66 ECOLIN_RS00820 DNA/RNA nuclease SfsA 0.51 ECOLIN_RS15170 helix-turn-helix domain-containing protein
Escherichia coli BW25113 0.66 b0146 sfsA sugar fermentation stimulation protein A (NCBI) 0.49 b3082 ygjM predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC100 0.66 OKFHMN_10340 sfsA DNA/RNA nuclease SfsA 0.48 OKFHMN_18570 higA type II toxin-antitoxin system antitoxin HigA
Escherichia coli ECRC62 0.66 BNILDI_08985 sfsA DNA/RNA nuclease SfsA 0.51 BNILDI_11015 higA transcriptional regulator low > 75
Escherichia coli ECRC99 0.66 KEDOAH_17815 sfsA DNA/RNA nuclease SfsA 0.48 KEDOAH_09575 higA type II toxin-antitoxin system antitoxin HigA
Escherichia coli BL21 0.66 ECD_00145 sugar fermentation stimulation protein A 0.49 ECD_02951 antitoxinof the HigB-HigA toxin-antitoxin system low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03516 Sugar fermentation stimulation protein A 0.49 OHPLBJKB_00620 Antitoxin HigA low > 73
Escherichia coli ECRC102 0.66 NIAGMN_08190 sfsA DNA/RNA nuclease SfsA 0.48 NIAGMN_16335 higA type II toxin-antitoxin system antitoxin HigA
Escherichia coli ECRC98 0.66 JDDGAC_13935 sfsA DNA/RNA nuclease SfsA 0.48 JDDGAC_22205 higA type II toxin-antitoxin system antitoxin HigA
Escherichia coli ECRC101 0.66 MCAODC_00855 sfsA DNA/RNA nuclease SfsA 0.48 MCAODC_09085 higA type II toxin-antitoxin system antitoxin HigA low > 87
Escherichia coli ECOR27 0.66 NOLOHH_02685 sfsA DNA/RNA nuclease SfsA 0.48 NOLOHH_10365 higA type II toxin-antitoxin system antitoxin HigA low > 75
Escherichia fergusonii Becca 0.65 EFB2_03898 Sugar fermentation stimulation protein A 0.52 EFB2_01209 Antitoxin HigA low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF86 Sugar/maltose fermentation stimulation protein homolog 0.42 GFF2244 FIG074102: hypothetical protein low > 78
Shewanella oneidensis MR-1 0.51 SO0875 sfsA sugar fermentation stimulation protein (NCBI ptt file) 0.31 SO_A0071 hypothetical protein (NCBI) low > 76
Pseudomonas fluorescens SBW25 0.43 PFLU_RS25705 DNA/RNA nuclease SfsA 0.22 PFLU_RS02190 transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS25705 DNA/RNA nuclease SfsA 0.22 PFLU_RS02190 transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_14430 XRE family transcriptional regulator 0.23 AO353_12765 transcriptional regulator low > 101

Not shown: 41 genomes with orthologs for HER17_RS05585 only; 2 genomes with orthologs for HER17_RS19575 only