Conservation of cofitness between HER17_RS12180 and HER17_RS18420 in Pectobacterium carotovorum WPP14

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12180 [citrate (pro-3S)-lyase] ligase 1.0 HER17_RS18420 G/U mismatch-specific DNA glycosylase 0.69 15
Rahnella sp. WP5 0.57 EX31_RS17785 [citrate (pro-3S)-lyase] ligase 0.77 EX31_RS08215 G/U mismatch-specific DNA glycosylase low > 89
Enterobacter sp. TBS_079 0.49 MPMX20_03827 [Citrate [pro-3S]-lyase] ligase 0.67 MPMX20_03910 G/U mismatch-specific DNA glycosylase low > 85
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3007 [citrate (pro-3S)-lyase] ligase 0.66 EX28DRAFT_3103 G/U mismatch-specific uracil-DNA glycosylase (EC 3.2.2.-) low > 76
Azospirillum sp. SherDot2 0.47 MPMX19_03122 [Citrate [pro-3S]-lyase] ligase 0.31 MPMX19_05950 G/U mismatch-specific DNA glycosylase low > 112
Escherichia coli ECOR38 0.43 HEPCGN_00830 citC [citrate (pro-3S)-lyase] ligase 0.63 HEPCGN_17500 mug G/U mismatch-specific DNA glycosylase low > 87
Escherichia coli BW25113 0.43 b0618 citC citrate lyase synthetase (citrate (pro-3S)-lyase ligase (VIMSS) 0.63 b3068 ygjF G/U mismatch-specific DNA glycosylase (NCBI) low > 76
Escherichia coli Nissle 1917 0.43 ECOLIN_RS03375 [citrate (pro-3S)-lyase] ligase 0.63 ECOLIN_RS17710 G/U mismatch-specific DNA glycosylase low > 55
Escherichia coli ECRC62 0.43 BNILDI_21830 citC [citrate (pro-3S)-lyase] ligase 0.63 BNILDI_01075 mug G/U mismatch-specific DNA glycosylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03087 [Citrate [pro-3S]-lyase] ligase 0.63 OHPLBJKB_00634 G/U mismatch-specific DNA glycosylase low > 73
Escherichia coli ECOR27 0.43 NOLOHH_23820 citC [citrate (pro-3S)-lyase] ligase 0.63 NOLOHH_10440 mug G/U mismatch-specific DNA glycosylase low > 75
Escherichia fergusonii Becca 0.43 EFB2_03473 [Citrate [pro-3S]-lyase] ligase 0.63 EFB2_00743 G/U mismatch-specific DNA glycosylase low > 86
Escherichia coli BL21 0.42 ECD_00586 citrate lyase ligase; [citrate [pro-3S]-lyase] ligase 0.63 ECD_02938 G/U mismatch-specific DNA glycosylase; xanthine DNA glycosylase low > 61
Escherichia coli ECRC98 0.42 JDDGAC_11090 citC [citrate (pro-3S)-lyase] ligase 0.62 JDDGAC_22285 mug G/U mismatch-specific DNA glycosylase low > 86
Escherichia coli ECRC99 0.42 KEDOAH_20525 citC [citrate (pro-3S)-lyase] ligase 0.62 KEDOAH_09495 mug G/U mismatch-specific DNA glycosylase — —
Escherichia coli ECRC101 0.42 MCAODC_26660 citC [citrate (pro-3S)-lyase] ligase 0.62 MCAODC_09165 mug G/U mismatch-specific DNA glycosylase low > 87
Klebsiella michiganensis M5al 0.42 BWI76_RS04435 [citrate (pro-3S)-lyase] ligase 0.68 BWI76_RS24565 mismatch-specific DNA-glycosylase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF222 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) 0.62 GFF3178 G:T/U mismatch-specific uracil/thymine DNA-glycosylase low > 78
Escherichia coli ECRC100 0.42 OKFHMN_07445 citC [citrate (pro-3S)-lyase] ligase 0.62 OKFHMN_18650 mug G/U mismatch-specific DNA glycosylase low > 80
Escherichia coli ECRC102 0.42 NIAGMN_05500 citC [citrate (pro-3S)-lyase] ligase 0.62 NIAGMN_16415 mug G/U mismatch-specific DNA glycosylase — —
Serratia liquefaciens MT49 0.40 IAI46_17005 [citrate (pro-3S)-lyase] ligase 0.69 IAI46_22135 G/U mismatch-specific DNA glycosylase low > 86

Not shown: 5 genomes with orthologs for HER17_RS12180 only; 15 genomes with orthologs for HER17_RS18420 only