Conservation of cofitness between HER17_RS20550 and HER17_RS14535 in Pectobacterium carotovorum WPP14

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20550 fatty acid oxidation complex subunit alpha FadB 1.0 HER17_RS14535 GDP-L-fucose synthase 0.74 1
Escherichia coli ECOR27 0.75 NOLOHH_06375 fadB fatty acid oxidation complex subunit alpha FadB 0.77 NOLOHH_15680 fcl GDP-L-fucose synthase low > 75
Escherichia coli BW25113 0.75 b3846 fadB fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase (NCBI) 0.77 b2052 fcl bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase (NCBI) low > 76
Escherichia coli ECRC102 0.75 NIAGMN_12000 fadB fatty acid oxidation complex subunit alpha FadB 0.77 NIAGMN_22295 fcl GDP-L-fucose synthase — —
Escherichia coli ECRC98 0.75 JDDGAC_17870 fadB fatty acid oxidation complex subunit alpha FadB 0.77 JDDGAC_28460 fcl GDP-L-fucose synthase low > 86
Escherichia coli ECRC99 0.75 KEDOAH_13905 fadB fatty acid oxidation complex subunit alpha FadB 0.77 KEDOAH_03800 fcl GDP-L-fucose synthase — —
Escherichia coli ECOR38 0.75 HEPCGN_12875 fadB fatty acid oxidation complex subunit alpha FadB 0.77 HEPCGN_03050 fcl GDP-L-fucose synthase low > 87
Escherichia coli ECRC101 0.75 MCAODC_04750 fadB fatty acid oxidation complex subunit alpha FadB 0.77 MCAODC_20590 fcl GDP-L-fucose synthase low > 87
Escherichia coli ECRC100 0.75 OKFHMN_14245 fadB fatty acid oxidation complex subunit alpha FadB 0.77 OKFHMN_24350 fcl GDP-L-fucose synthase low > 80
Enterobacter asburiae PDN3 0.74 EX28DRAFT_4510 fatty oxidation complex, alpha subunit FadB 0.78 EX28DRAFT_0503 Nucleoside-diphosphate-sugar epimerases low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF273 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) 0.77 GFF3876 GDP-L-fucose synthetase (EC 1.1.1.271) low > 78
Enterobacter sp. TBS_079 0.73 MPMX20_04436 Fatty acid oxidation complex subunit alpha 0.77 MPMX20_03034 GDP-L-fucose synthase low > 85
Escherichia coli ECRC62 0.73 BNILDI_05155 fadB fatty acid oxidation complex subunit alpha FadB 0.77 BNILDI_14590 fcl GDP-L-fucose synthase low > 75
Escherichia coli BL21 0.73 ECD_03737 fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 0.77 ECD_01958 bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase low > 61
Escherichia fergusonii Becca 0.73 EFB2_04771 Fatty acid oxidation complex subunit alpha 0.77 EFB2_01802 GDP-L-fucose synthase low > 86
Dickeya dadantii 3937 0.72 DDA3937_RS20250 fatty acid oxidation complex subunit alpha FadB 0.23 DDA3937_RS18680 GDP-L-fucose synthase low > 74
Dickeya dianthicola 67-19 0.72 HGI48_RS00975 fatty acid oxidation complex subunit alpha FadB 0.22 HGI48_RS18610 GDP-L-fucose synthase low > 71
Dickeya dianthicola ME23 0.71 DZA65_RS01035 fatty acid oxidation complex subunit alpha FadB 0.22 DZA65_RS19745 GDP-L-fucose synthase low > 75
Pseudomonas fluorescens SBW25 0.53 PFLU_RS07650 fatty acid oxidation complex subunit alpha FadB 0.66 PFLU_RS17885 GDP-L-fucose synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS07650 fatty acid oxidation complex subunit alpha FadB 0.66 PFLU_RS17885 GDP-L-fucose synthase low > 109
Pseudomonas stutzeri RCH2 0.52 Psest_2654 fatty oxidation complex, alpha subunit FadB 0.69 Psest_1819 Nucleoside-diphosphate-sugar epimerases — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF2109 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) 0.68 GFF1841 GDP-L-fucose synthetase (EC 1.1.1.271) low > 90
Mycobacterium tuberculosis H37Rv 0.22 Rv0860 Probable fatty oxidation protein FadB 0.49 Rv1512 Probable nucleotide-sugar epimerase EpiA — —

Not shown: 31 genomes with orthologs for HER17_RS20550 only; 35 genomes with orthologs for HER17_RS14535 only