Conservation of cofitness between HER17_RS12215 and HER17_RS14345 in Pectobacterium carotovorum WPP14

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12215 SDR family oxidoreductase 1.0 HER17_RS14345 sensor domain-containing diguanylate cyclase 0.62 11
Escherichia coli ECRC62 0.65 BNILDI_14755 yeeZ Protein YeeZ 0.45 BNILDI_15970 dgcP diguanylate cyclase DgcP low > 75
Enterobacter sp. TBS_079 0.64 MPMX20_03000 Protein YeeZ 0.47 MPMX20_01829 Diguanylate cyclase DgcP low > 85
Klebsiella michiganensis M5al 0.63 BWI76_RS18915 NAD(P)-dependent oxidoreductase 0.44 BWI76_RS11425 GAF domain/diguanylate cyclase low > 92
Escherichia coli ECOR38 0.62 HEPCGN_03235 yeeZ Protein YeeZ 0.45 HEPCGN_05050 dgcP diguanylate cyclase DgcP low > 87
Escherichia coli ECRC101 0.62 MCAODC_20410 yeeZ Protein YeeZ 0.45 MCAODC_18750 dgcP diguanylate cyclase DgcP low > 87
Escherichia fergusonii Becca 0.62 EFB2_01840 Protein YeeZ 0.45 EFB2_02201 Diguanylate cyclase DgcP low > 86
Enterobacter asburiae PDN3 0.62 EX28DRAFT_0542 Nucleoside-diphosphate-sugar epimerases 0.48 EX28DRAFT_1786 diguanylate cyclase (GGDEF) domain low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_01684 Protein YeeZ 0.45 OHPLBJKB_01939 Diguanylate cyclase DgcP low > 73
Escherichia coli ECRC99 0.62 KEDOAH_03620 yeeZ Protein YeeZ 0.45 KEDOAH_01450 dgcP diguanylate cyclase DgcP — —
Escherichia coli BW25113 0.62 b2016 yeeZ predicted epimerase, with NAD(P)-binding Rossmann-fold domain (NCBI) 0.45 b1794 yeaP orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC102 0.62 NIAGMN_22475 yeeZ Protein YeeZ 0.40 NIAGMN_01405 dgcP Diguanylate cyclase DgcP — —
Escherichia coli BL21 0.62 ECD_01919 putative epimerase 0.45 ECD_01763 diguanylate cyclase low > 61
Escherichia coli ECOR27 0.62 NOLOHH_15855 yeeZ Protein YeeZ 0.45 NOLOHH_17185 dgcP diguanylate cyclase DgcP low > 75
Escherichia coli ECRC100 0.62 OKFHMN_24530 yeeZ Protein YeeZ 0.40 OKFHMN_26660 gAF GAF domain low > 80
Escherichia coli ECRC98 0.61 JDDGAC_28640 yeeZ Protein YeeZ 0.45 JDDGAC_01235 dgcP diguanylate cyclase DgcP low > 86
Escherichia coli Nissle 1917 0.61 ECOLIN_RS11925 SDR family oxidoreductase 0.45 ECOLIN_RS09995 diguanylate cyclase DgcP — —
Azospirillum sp. SherDot2 0.10 MPMX19_02719 Protein YeeZ 0.45 MPMX19_01037 Diguanylate cyclase DgcP low > 112
Azospirillum brasilense Sp245 0.10 AZOBR_RS17660 epimerase 0.50 AZOBR_RS31680 diguanylate cyclase low > 97

Not shown: 27 genomes with orthologs for HER17_RS12215 only; 3 genomes with orthologs for HER17_RS14345 only