Conservation of cofitness between HER17_RS19710 and HER17_RS12460 in Pectobacterium carotovorum WPP14

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS19710 alcohol dehydrogenase 1.0 HER17_RS12460 arginine ABC transporter permease ArtQ 0.49 20
Serratia liquefaciens MT49 0.81 IAI46_21750 alcohol dehydrogenase 0.88 IAI46_08410 arginine ABC transporter permease ArtQ low > 86
Dickeya dadantii 3937 0.81 DDA3937_RS01800 alcohol dehydrogenase 0.85 DDA3937_RS09505 arginine ABC transporter permease ArtQ low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS01695 alcohol dehydrogenase 0.84 HGI48_RS09520 arginine ABC transporter permease ArtQ low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS01770 alcohol dehydrogenase 0.84 DZA65_RS09835 arginine ABC transporter permease ArtQ low > 75
Enterobacter sp. TBS_079 0.76 MPMX20_03855 Alcohol dehydrogenase YqhD 0.87 MPMX20_01505 Arginine ABC transporter permease protein ArtQ low > 85
Escherichia coli ECRC62 0.76 BNILDI_00795 yqhD alcohol dehydrogenase 0.88 BNILDI_20540 artQ arginine ABC transporter permease ArtQ low > 75
Escherichia coli ECOR38 0.76 HEPCGN_17810 yqhD alcohol dehydrogenase 0.88 HEPCGN_02115 artQ arginine ABC transporter permease ArtQ low > 87
Escherichia coli BW25113 0.76 b3011 yqhD alcohol dehydrogenase, NAD(P)-dependent (NCBI) 0.88 b0862 artQ arginine transporter subunit (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_00690 Alcohol dehydrogenase YqhD 0.88 OHPLBJKB_02806 Arginine ABC transporter permease protein ArtQ low > 73
Escherichia coli BL21 0.76 ECD_02884 aldehyde reductase, NADPH-dependent 0.88 ECD_00867 arginine ABC transporter permease low > 61
Escherichia fergusonii Becca 0.76 EFB2_00799 Alcohol dehydrogenase YqhD 0.88 EFB2_03199 Arginine ABC transporter permease protein ArtQ low > 86
Enterobacter asburiae PDN3 0.76 EX28DRAFT_3049 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 0.87 EX28DRAFT_2089 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 76
Klebsiella michiganensis M5al 0.76 BWI76_RS24300 NADH-dependent alcohol dehydrogenase 0.85 BWI76_RS09510 arginine transporter permease subunit ArtQ
Escherichia coli ECRC99 0.76 KEDOAH_09200 yqhD alcohol dehydrogenase 0.88 KEDOAH_22015 artQ arginine ABC transporter permease ArtQ
Escherichia coli ECRC102 0.76 NIAGMN_16710 yqhD alcohol dehydrogenase 0.88 NIAGMN_03940 artQ arginine ABC transporter permease ArtQ
Escherichia coli ECRC100 0.76 OKFHMN_18945 yqhD alcohol dehydrogenase 0.88 OKFHMN_05895 artQ arginine ABC transporter permease ArtQ low > 80
Escherichia coli ECRC98 0.76 JDDGAC_22580 yqhD alcohol dehydrogenase 0.88 JDDGAC_09530 artQ arginine ABC transporter permease ArtQ low > 86
Escherichia coli ECRC101 0.76 MCAODC_09460 yqhD alcohol dehydrogenase 0.88 MCAODC_25110 artQ arginine ABC transporter permease ArtQ low > 87
Escherichia coli ECOR27 0.76 NOLOHH_10720 yqhD alcohol dehydrogenase 0.88 NOLOHH_22285 artQ arginine ABC transporter permease ArtQ low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3124 NADPH-dependent broad range aldehyde dehydrogenase YqhD 0.86 GFF770 Arginine ABC transporter, permease protein ArtQ low > 78
Escherichia coli Nissle 1917 0.75 ECOLIN_RS17335 alcohol dehydrogenase 0.88 ECOLIN_RS04590 arginine ABC transporter permease ArtQ
Pseudomonas putida KT2440 0.63 PP_2492 alcohol dehydrogenase, NAD(P)-dependent 0.35 PP_0281 Amino acid ABC transporter, permease protein low > 96
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_17690 NADH-dependent alcohol dehydrogenase 0.43 CSW01_17970 ABC transporter low > 62
Pseudomonas sp. S08-1 0.44 OH686_06550 NADPH-dependent broad range aldehyde dehydrogenase YqhD 0.33 OH686_14495 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) low > 80

Not shown: 17 genomes with orthologs for HER17_RS19710 only; 16 genomes with orthologs for HER17_RS12460 only