Conservation of cofitness between HER17_RS12165 and HER17_RS12295 in Pectobacterium carotovorum WPP14

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12165 citrate lyase subunit alpha 1.0 HER17_RS12295 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO 0.76 14
Dickeya dadantii 3937 0.88 DDA3937_RS09790 citrate lyase subunit alpha 0.88 DDA3937_RS09665 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO — —
Dickeya dianthicola ME23 0.87 DZA65_RS10115 citrate lyase subunit alpha 0.88 DZA65_RS09985 hypothetical protein low > 75
Dickeya dianthicola 67-19 0.87 HGI48_RS09805 citrate lyase subunit alpha 0.86 HGI48_RS09675 YcaO-like family protein low > 71
Enterobacter asburiae PDN3 0.80 EX28DRAFT_3004 citrate lyase, alpha subunit 0.84 EX28DRAFT_2030 YcaO-type kinase domain low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_03824 Citrate lyase alpha chain 0.84 MPMX20_01564 Ribosomal protein S12 methylthiotransferase accessory factor YcaO low > 85
Rahnella sp. WP5 0.78 EX31_RS17800 citrate lyase subunit alpha 0.83 EX31_RS18260 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF219 Citrate lyase alpha chain (EC 4.1.3.6) 0.82 GFF3662 FIG00638589: hypothetical protein low > 78
Klebsiella michiganensis M5al 0.68 BWI76_RS04450 citrate lyase subunit alpha 0.83 BWI76_RS09745 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03090 Citrate lyase alpha chain 0.82 OHPLBJKB_02763 Ribosomal protein S12 methylthiotransferase accessory factor YcaO low > 73
Escherichia coli ECRC62 0.66 BNILDI_21845 citF citrate lyase subunit alpha 0.82 BNILDI_20315 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO low > 75
Escherichia coli ECOR27 0.66 NOLOHH_23835 citF citrate lyase subunit alpha 0.82 NOLOHH_22060 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO low > 75
Escherichia coli BL21 0.66 ECD_00583 citrate lyase, citrate-ACP transferase (alpha) subunit 0.82 ECD_00909 ribosomal protein S12 methylthiotransferase accessory factor low > 61
Escherichia coli BW25113 0.66 b0615 citF citrate lyase, citrate-ACP transferase (alpha) subunit (NCBI) 0.82 b0905 ycaO orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR38 0.66 HEPCGN_00815 citF citrate lyase subunit alpha 0.82 HEPCGN_23020 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO low > 87
Escherichia coli Nissle 1917 0.66 ECOLIN_RS03360 citrate lyase subunit alpha 0.82 ECOLIN_RS04795 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO — —
Escherichia fergusonii Becca 0.66 EFB2_03476 Citrate lyase alpha chain 0.82 EFB2_03159 Ribosomal protein S12 methylthiotransferase accessory factor YcaO low > 86
Escherichia coli ECRC100 0.66 OKFHMN_07460 citF citrate lyase subunit alpha 0.82 OKFHMN_05500 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO low > 80
Escherichia coli ECRC101 0.66 MCAODC_26675 citF citrate lyase subunit alpha 0.82 MCAODC_24890 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO low > 87
Escherichia coli ECRC102 0.66 NIAGMN_05515 citF citrate lyase subunit alpha 0.82 NIAGMN_03220 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO — —
Escherichia coli ECRC99 0.66 KEDOAH_20510 citF citrate lyase subunit alpha 0.82 KEDOAH_22235 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO — —
Escherichia coli ECRC98 0.66 JDDGAC_11105 citF citrate lyase subunit alpha 0.82 JDDGAC_09110 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO low > 86
Serratia liquefaciens MT49 0.63 IAI46_16990 citrate lyase subunit alpha 0.84 IAI46_08620 YcaO-like family protein low > 86

Not shown: 4 genomes with orthologs for HER17_RS12165 only; 3 genomes with orthologs for HER17_RS12295 only