Conservation of cofitness between HER17_RS11650 and HER17_RS02375 in Pectobacterium carotovorum WPP14

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11650 cupin domain-containing protein 1.0 HER17_RS02375 fumarate reductase subunit FrdD 0.64 20
Serratia liquefaciens MT49 0.84 IAI46_10385 cupin domain-containing protein 0.84 IAI46_01535 fumarate reductase subunit FrdD low > 86
Dickeya dianthicola ME23 0.83 DZA65_RS11890 cupin domain-containing protein 0.81 DZA65_RS20195 fumarate reductase subunit FrdD low > 75
Dickeya dianthicola 67-19 0.83 HGI48_RS11555 cupin domain-containing protein 0.81 HGI48_RS19075 fumarate reductase subunit FrdD low > 71
Dickeya dadantii 3937 0.83 DDA3937_RS11510 cupin domain-containing protein 0.82 DDA3937_RS18980 fumarate reductase subunit FrdD 0.33 13
Enterobacter asburiae PDN3 0.82 EX28DRAFT_1802 Uncharacterized conserved protein 0.87 EX28DRAFT_3352 succinate dehydrogenase subunit D (EC 1.3.5.1) low > 76
Klebsiella michiganensis M5al 0.81 BWI76_RS11270 50S ribosomal protein L16 arginine hydroxylase 0.82 BWI76_RS02440 fumarate reductase subunit D — —
Rahnella sp. WP5 0.81 EX31_RS24550 cupin domain-containing protein 0.78 EX31_RS08915 fumarate reductase subunit FrdD low > 89
Enterobacter sp. TBS_079 0.80 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase 0.86 MPMX20_00434 Fumarate reductase subunit D low > 85
Escherichia coli BW25113 0.80 b1128 ycfD orf, hypothetical protein (VIMSS) 0.89 b4151 frdD fumarate reductase subunit D (NCBI) low > 76
Escherichia coli ECRC62 0.80 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.88 BNILDI_06870 frdD fumarate reductase subunit FrdD low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF3413 FIG002776: hypothetical protein 0.88 GFF1999 Fumarate reductase subunit D low > 78
Escherichia coli Nissle 1917 0.80 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase 0.89 ECOLIN_RS24135 fumarate reductase subunit FrdD — —
Escherichia coli ECOR27 0.80 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.88 NOLOHH_04620 frdD fumarate reductase subunit FrdD low > 75
Escherichia coli ECRC101 0.80 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.89 MCAODC_02870 frdD fumarate reductase subunit FrdD low > 87
Escherichia coli ECOR38 0.80 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.89 HEPCGN_10585 frdD fumarate reductase subunit FrdD low > 87
Escherichia coli ECRC102 0.80 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.89 NIAGMN_10205 frdD fumarate reductase subunit FrdD — —
Escherichia coli BL21 0.80 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 0.89 ECD_04023 fumarate reductase (anaerobic), membrane anchor subunit low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase 0.88 OHPLBJKB_03889 Fumarate reductase subunit D low > 73
Escherichia coli ECRC99 0.80 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.89 KEDOAH_15805 frdD fumarate reductase subunit FrdD — —
Escherichia coli ECRC100 0.80 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.89 OKFHMN_12360 frdD fumarate reductase subunit FrdD low > 80
Escherichia fergusonii Becca 0.80 EFB2_02847 50S ribosomal protein L16 3-hydroxylase 0.89 EFB2_04382 Fumarate reductase subunit D low > 86
Escherichia coli ECRC98 0.80 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.89 JDDGAC_15995 frdD fumarate reductase subunit FrdD low > 86
Erwinia tracheiphila SCR3 0.79 LU632_RS14600 cupin domain-containing protein 0.70 LU632_RS01905 frdD fumarate reductase subunit FrdD low > 74

Not shown: 19 genomes with orthologs for HER17_RS11650 only; 1 genomes with orthologs for HER17_RS02375 only