Conservation of cofitness between HER17_RS03440 and HER17_RS01770 in Pectobacterium carotovorum WPP14

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS03440 dihydrodipicolinate synthase family protein 1.0 HER17_RS01770 DNA uptake porin HofQ 0.58 18
Dickeya dianthicola 67-19 0.88 HGI48_RS17790 dihydrodipicolinate synthase family protein 0.70 HGI48_RS19685 DNA uptake porin HofQ low > 71
Dickeya dadantii 3937 0.88 DDA3937_RS17850 dihydrodipicolinate synthase family protein 0.70 DDA3937_RS19555 DNA uptake porin HofQ low > 74
Dickeya dianthicola ME23 0.87 DZA65_RS18935 dihydrodipicolinate synthase family protein 0.70 DZA65_RS20770 DNA uptake porin HofQ low > 75
Pantoea sp. MT58 0.71 IAI47_15745 dihydrodipicolinate synthase family protein 0.53 IAI47_01885 DNA uptake porin HofQ low > 76
Klebsiella michiganensis M5al 0.71 BWI76_RS15245 dihydrodipicolinate synthase family protein 0.43 BWI76_RS26100 DNA transporter HofQ low > 92
Erwinia tracheiphila SCR3 0.70 LU632_RS04970 dihydrodipicolinate synthase family protein 0.53 LU632_RS22875 hofQ DNA uptake porin HofQ low > 74
Escherichia fergusonii Becca 0.70 EFB2_03419 4-hydroxy-tetrahydrodipicolinate synthase 0.47 EFB2_00437 Type IV pilus biogenesis and competence protein PilQ low > 86
Escherichia coli Nissle 1917 0.69 ECOLIN_RS03650 dihydrodipicolinate synthase family protein 0.48 ECOLIN_RS19370 DNA uptake porin HofQ — —
Escherichia coli BW25113 0.22 b0268 yagE 2-keto-3-deoxy gluconate (KDG) aldolase; CP4-6 prophage (NCBI) 0.48 b3391 hofQ predicted fimbrial transporter (NCBI) low > 76
Escherichia coli ECOR38 0.21 HEPCGN_16725 nanA N-acetylneuraminate lyase 0.47 HEPCGN_15925 hofQ DNA uptake porin HofQ low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_00480 N-acetylneuraminate lyase 0.48 OHPLBJKB_00312 Type IV pilus biogenesis and competence protein PilQ low > 73
Escherichia coli ECRC102 0.21 NIAGMN_15610 nanA N-acetylneuraminate lyase 0.47 NIAGMN_14875 hofQ DNA uptake porin HofQ — —
Escherichia coli BL21 0.21 ECD_03085 N-acetylneuraminate lyase 0.47 ECD_03243 DNA catabolic putative fimbrial transporter low > 61
Escherichia coli ECRC98 0.21 JDDGAC_21475 nanA N-acetylneuraminate lyase 0.47 JDDGAC_20735 hofQ DNA uptake porin HofQ low > 86
Escherichia coli ECRC101 0.21 MCAODC_08370 nanA N-acetylneuraminate lyase 0.47 MCAODC_07635 hofQ DNA uptake porin HofQ low > 87
Escherichia coli ECRC99 0.21 KEDOAH_10300 nanA N-acetylneuraminate lyase 0.47 KEDOAH_11035 hofQ DNA uptake porin HofQ — —
Escherichia coli ECRC100 0.21 OKFHMN_17850 nanA N-acetylneuraminate lyase 0.47 OKFHMN_17105 hofQ DNA uptake porin HofQ low > 80
Escherichia coli ECOR27 0.21 NOLOHH_09650 nanA N-acetylneuraminate lyase 0.47 NOLOHH_08895 hofQ DNA uptake porin HofQ low > 75
Enterobacter sp. TBS_079 0.20 MPMX20_00551 Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE 0.43 MPMX20_04280 Type IV pilus biogenesis and competence protein PilQ low > 85

Not shown: 7 genomes with orthologs for HER17_RS03440 only; 10 genomes with orthologs for HER17_RS01770 only