Conservation of cofitness between HEPCGN_17305 and HEPCGN_25675 in Escherichia coli ECOR38

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_17305 yqjF Inner membrane protein YqjF 1.0 HEPCGN_25675 pdeR cyclic di-GMP phosphodiesterase 0.62 5
Escherichia coli ECRC98 1.00 JDDGAC_22105 yqjF Inner membrane protein YqjF 0.99 JDDGAC_05070 pdeR cyclic di-GMP phosphodiesterase low > 86
Escherichia coli ECRC100 1.00 OKFHMN_18470 yqjF Inner membrane protein YqjF 0.99 OKFHMN_02525 pdeR cyclic di-GMP phosphodiesterase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00597 Inner membrane protein YqjF 0.99 OHPLBJKB_02396 Cyclic di-GMP phosphodiesterase PdeR low > 73
Escherichia coli ECOR27 1.00 NOLOHH_10250 yqjF Inner membrane protein YqjF 0.99 NOLOHH_20190 pdeR cyclic di-GMP phosphodiesterase — —
Escherichia coli ECRC102 1.00 NIAGMN_16235 yqjF Inner membrane protein YqjF 0.99 NIAGMN_26695 pdeR cyclic di-GMP phosphodiesterase — —
Escherichia coli ECRC62 0.99 BNILDI_01265 doxX DoxX family protein 0.99 BNILDI_18340 pdeR cyclic di-GMP phosphodiesterase low > 75
Escherichia coli ECRC99 0.99 KEDOAH_09675 doxX DoxX 0.99 KEDOAH_26240 pdeR cyclic di-GMP phosphodiesterase — —
Escherichia fergusonii Becca 0.98 EFB2_00711 Inner membrane protein YqjF 0.99 EFB2_02639 Cyclic di-GMP phosphodiesterase PdeR low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF3198 Inner membrane protein YqjF 0.80 GFF2699 FIG00637999: hypothetical protein low > 78
Escherichia coli BL21 0.81 ECD_02970 putative quinol oxidase subunit 0.99 ECD_01262 cyclic-di-GMP phosphodiesterase; csgD regulator; modulator of RNase II stability low > 61
Escherichia coli BW25113 0.81 b3101 yqjF orf, hypothetical protein (VIMSS) 0.99 b1285 gmr modulator of Rnase II stability (NCBI) low > 76
Escherichia coli Nissle 1917 0.79 ECOLIN_RS17875 DoxX family protein 0.99 ECOLIN_RS07755 cyclic di-GMP phosphodiesterase low > 55
Enterobacter sp. TBS_079 0.79 MPMX20_04010 Inner membrane protein YqjF 0.80 MPMX20_02488 Cyclic di-GMP phosphodiesterase PdeR low > 85
Enterobacter asburiae PDN3 0.78 EX28DRAFT_3169 Predicted membrane protein 0.80 EX28DRAFT_0960 PAS domain S-box/diguanylate cyclase (GGDEF) domain low > 76
Pantoea sp. MT58 0.74 IAI47_02865 DoxX family protein 0.69 IAI47_09305 cyclic di-GMP phosphodiesterase low > 76
Serratia liquefaciens MT49 0.67 IAI46_22270 DoxX family protein 0.62 IAI46_24280 cyclic di-GMP phosphodiesterase low > 86
Rahnella sp. WP5 0.60 EX31_RS12630 DoxX family protein 0.58 EX31_RS08335 cyclic di-GMP phosphodiesterase 0.27 52

Not shown: 7 genomes with orthologs for HEPCGN_17305 only; 4 genomes with orthologs for HEPCGN_25675 only