Conservation of cofitness between HEPCGN_05335 and HEPCGN_25560 in Escherichia coli ECOR38

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_05335 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 1.0 HEPCGN_25560 rluB 23S rRNA pseudouridine(2605) synthase RluB 0.60 7
Escherichia coli ECRC99 1.00 KEDOAH_01140 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 0.99 KEDOAH_26135 rluB 23S rRNA pseudouridine(2605) synthase RluB
Escherichia coli ECRC102 1.00 NIAGMN_01095 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 0.99 NIAGMN_26800 rluB 23S rRNA pseudouridine(2605) synthase RluB
Escherichia coli ECRC62 1.00 BNILDI_16270 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 0.99 BNILDI_18445 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 75
Escherichia fergusonii Becca 1.00 EFB2_02257 PTS system N,N'-diacetylchitobiose-specific EIIA component 1.00 EFB2_02658 Ribosomal large subunit pseudouridine synthase B low > 86
Escherichia coli BW25113 1.00 b1736 chbA N,N'-diacetylchitobiose-specific enzyme IIA component of PTS (NCBI) 1.00 b1269 rluB 23S rRNA pseudouridylate synthase (NCBI)
Escherichia coli Nissle 1917 1.00 ECOLIN_RS09680 PTS N,N'-diacetylchitobiose transporter subunit IIA 1.00 ECOLIN_RS07635 23S rRNA pseudouridine(2605) synthase RluB
Escherichia coli ECRC101 1.00 MCAODC_18440 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 0.99 MCAODC_15635 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01996 'PTS system N,N'-diacetylchitobiose-specific EIIA component' transl_table=11 1.00 OHPLBJKB_02415 Ribosomal large subunit pseudouridine synthase B low > 73
Escherichia coli BL21 1.00 ECD_01705 N,N'-diacetylchitobiose-specific enzyme IIA component of PTS 1.00 ECD_01245 23S rRNA pseudouridine(2605) synthase
Escherichia coli ECRC98 1.00 JDDGAC_01545 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 0.99 JDDGAC_05175 rluB 23S rRNA pseudouridine(2605) synthase RluB
Escherichia coli ECOR27 1.00 NOLOHH_17485 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 0.99 NOLOHH_20295 rluB 23S rRNA pseudouridine(2605) synthase RluB
Escherichia coli ECRC100 1.00 OKFHMN_26970 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 0.99 OKFHMN_02630 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF3504 PTS system, cellobiose-specific IIA component (EC 2.7.1.69) 0.98 GFF2719 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) low > 78
Klebsiella michiganensis M5al 0.83 BWI76_RS11735 PTS N,N'-diacetylchitobiose transporter subunit IIA 0.91 BWI76_RS11880 23S rRNA pseudouridylate synthase B low > 92
Enterobacter asburiae PDN3 0.83 EX28DRAFT_1740 Phosphotransferase system cellobiose-specific component IIA 0.91 EX28DRAFT_0940 pseudouridine synthase low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_01878 PTS system N,N'-diacetylchitobiose-specific EIIA component 0.95 MPMX20_02507 Ribosomal large subunit pseudouridine synthase B low > 85
Dickeya dianthicola ME23 0.47 DZA65_RS17015 PTS lactose/cellobiose transporter subunit IIA 0.82 DZA65_RS10980 23S rRNA pseudouridine(2605) synthase RluB low > 75
Dickeya dianthicola 67-19 0.47 HGI48_RS15940 PTS lactose/cellobiose transporter subunit IIA 0.82 HGI48_RS10500 23S rRNA pseudouridine(2605) synthase RluB low > 71
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_06485 PTS lactose/cellobiose transporter subunit IIA 0.66 CSW01_05970 23S rRNA pseudouridylate synthase B
Pectobacterium carotovorum WPP14 0.43 HER17_RS11830 PTS lactose/cellobiose transporter subunit IIA 0.83 HER17_RS10900 23S rRNA pseudouridine(2605) synthase RluB low > 75
Serratia liquefaciens MT49 0.40 IAI46_09250 PTS lactose/cellobiose transporter subunit IIA 0.86 IAI46_13995 23S rRNA pseudouridine(2605) synthase RluB

Not shown: 1 genomes with orthologs for HEPCGN_05335 only; 12 genomes with orthologs for HEPCGN_25560 only