Conservation of cofitness between GFF1826 and GFF4507 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1826 Alkylated DNA repair protein AlkB 1.0 GFF4507 Glycerol dehydrogenase (EC 1.1.1.6) 0.64 1
Escherichia coli ECRC102 0.82 NIAGMN_20980 alkB DNA oxidative demethylase AlkB 0.78 NIAGMN_05595 hcxA hydroxycarboxylate dehydrogenase HcxA — —
Escherichia coli ECRC101 0.82 MCAODC_14265 alkB DNA oxidative demethylase AlkB 0.78 MCAODC_26755 hcxA hydroxycarboxylate dehydrogenase HcxA low > 87
Escherichia coli ECRC99 0.82 KEDOAH_04970 alkB DNA oxidative demethylase AlkB 0.78 KEDOAH_20430 hcxA hydroxycarboxylate dehydrogenase HcxA — —
Escherichia coli ECRC100 0.82 OKFHMN_23215 alkB DNA oxidative demethylase AlkB 0.78 OKFHMN_07540 hcxA hydroxycarboxylate dehydrogenase HcxA low > 80
Escherichia coli ECRC98 0.82 JDDGAC_27175 alkB DNA oxidative demethylase AlkB 0.78 JDDGAC_11185 hcxA hydroxycarboxylate dehydrogenase HcxA low > 86
Escherichia coli BW25113 0.82 b2212 alkB oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions (NCBI) 0.79 b0599 ybdH predicted oxidoreductase (NCBI) low > 76
Escherichia coli BL21 0.82 ECD_02139 oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions 0.79 ECD_00567 putative oxidoreductase low > 61
Escherichia fergusonii Becca 0.82 EFB2_01643 Alpha-ketoglutarate-dependent dioxygenase AlkB 0.79 EFB2_03492 Hydroxycarboxylate dehydrogenase A low > 86
Escherichia coli Nissle 1917 0.82 ECOLIN_RS26540 DNA oxidative demethylase AlkB 0.79 ECOLIN_RS03290 hydroxycarboxylate dehydrogenase HcxA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_01498 Alpha-ketoglutarate-dependent dioxygenase AlkB 0.79 OHPLBJKB_03106 Hydroxycarboxylate dehydrogenase A low > 73
Escherichia coli ECOR27 0.81 NOLOHH_14790 alkB DNA oxidative demethylase AlkB 0.78 NOLOHH_23915 hcxA hydroxycarboxylate dehydrogenase HcxA low > 75
Escherichia coli ECRC62 0.81 BNILDI_13710 alkB DNA oxidative demethylase AlkB 0.79 BNILDI_21925 hcxA hydroxycarboxylate dehydrogenase HcxA low > 75
Escherichia coli ECOR38 0.80 HEPCGN_22480 alkB DNA oxidative demethylase AlkB 0.79 HEPCGN_00740 hcxA hydroxycarboxylate dehydrogenase HcxA low > 87
Enterobacter sp. TBS_079 0.73 MPMX20_03172 Alpha-ketoglutarate-dependent dioxygenase AlkB 0.76 MPMX20_01258 Hydroxycarboxylate dehydrogenase A low > 85
Enterobacter asburiae PDN3 0.72 EX28DRAFT_0364 Alkylated DNA repair protein 0.72 EX28DRAFT_2364 Glycerol dehydrogenase and related enzymes low > 76
Klebsiella michiganensis M5al 0.72 BWI76_RS19890 alpha-ketoglutarate-dependent dioxygenase AlkB 0.77 BWI76_RS07795 oxidoreductase low > 92
Dickeya dianthicola ME23 0.59 DZA65_RS04440 DNA oxidative demethylase AlkB 0.59 DZA65_RS09640 oxidoreductase low > 75
Dickeya dadantii 3937 0.59 DDA3937_RS04560 DNA oxidative demethylase AlkB 0.59 DDA3937_RS09310 oxidoreductase low > 74
Rahnella sp. WP5 0.58 EX31_RS03140 DNA oxidative demethylase AlkB 0.64 EX31_RS01370 oxidoreductase low > 89
Pectobacterium carotovorum WPP14 0.57 HER17_RS17090 DNA oxidative demethylase AlkB 0.60 HER17_RS12810 oxidoreductase low > 75
Dickeya dianthicola 67-19 0.56 HGI48_RS04520 DNA oxidative demethylase AlkB 0.59 HGI48_RS09335 oxidoreductase low > 71
Serratia liquefaciens MT49 0.52 IAI46_16945 DNA oxidative demethylase AlkB 0.59 IAI46_12145 oxidoreductase low > 86

Not shown: 36 genomes with orthologs for GFF1826 only; 0 genomes with orthologs for GFF4507 only