Conservation of cofitness between HP15_3376 and HP15_34 in Marinobacter adhaerens HP15

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_3376 RNA polymerase-associated protein RapA 1.0 HP15_34 transcriptional regulator, IclR family 0.66 19
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_4599 RNA polymerase associated protein RapA (EC 3.6.1.-) 0.65 PfGW456L13_3409 Transcriptional regulator, IclR family low > 87
Pseudomonas simiae WCS417 0.41 PS417_06645 RNA polymerase-associated protein RapA 0.09 PS417_18190 IclR family transcriptional regulator low > 88
Pantoea sp. MT58 0.41 IAI47_16055 RNA polymerase-associated protein RapA 0.10 IAI47_17995 glyoxylate bypass operon transcriptional repressor IclR low > 76
Escherichia fergusonii Becca 0.40 EFB2_03986 RNA polymerase-associated protein RapA 0.11 EFB2_03555 HTH-type transcriptional repressor AllR low > 86
Escherichia coli Nissle 1917 0.40 ECOLIN_RS00315 RNA polymerase-associated protein RapA 0.11 ECOLIN_RS02950 HTH-type transcriptional repressor AllR low > 52
Escherichia coli ECRC62 0.40 BNILDI_08460 rapA RNA polymerase-associated protein RapA 0.10 BNILDI_22340 allR HTH-type transcriptional repressor AllR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_03599 RNA polymerase-associated protein RapA 0.11 OHPLBJKB_03174 HTH-type transcriptional repressor AllR 0.84 39
Escherichia coli BL21 0.40 ECD_00061 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase 0.11 ECD_00456 glyoxylate-inducible transcriptional repressor of all and gcl operons low > 60
Escherichia coli ECRC102 0.40 NIAGMN_08650 rapA RNA polymerase-associated protein RapA 0.11 NIAGMN_05980 allR HTH-type transcriptional repressor AllR — —
Escherichia coli ECOR38 0.40 HEPCGN_08790 rapA RNA polymerase-associated protein RapA 0.11 HEPCGN_06565 allR HTH-type transcriptional repressor AllR low > 85
Escherichia coli ECOR27 0.40 NOLOHH_03145 rapA RNA polymerase-associated protein RapA 0.11 NOLOHH_00910 allR HTH-type transcriptional repressor AllR low > 57
Escherichia coli BW25113 0.40 b0059 hepA ATP-dependent helicase HepA (NCBI) 0.11 b0506 allR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECRC98 0.40 JDDGAC_14395 rapA RNA polymerase-associated protein RapA 0.11 JDDGAC_11575 allR HTH-type transcriptional repressor AllR — —
Escherichia coli ECRC101 0.40 OKFHMN_10800 rapA RNA polymerase-associated protein RapA 0.11 OKFHMN_07930 allR HTH-type transcriptional repressor AllR — —
Escherichia coli ECRC101 0.40 MCAODC_01315 rapA RNA polymerase-associated protein RapA 0.11 MCAODC_27145 allR HTH-type transcriptional repressor AllR — —
Escherichia coli ECRC99 0.40 KEDOAH_17355 rapA RNA polymerase-associated protein RapA 0.11 KEDOAH_20040 allR HTH-type transcriptional repressor AllR — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) 0.11 GFF1356 Acetate operon repressor low > 78
Rahnella sp. WP5 0.40 EX31_RS03745 RNA polymerase-associated protein RapA 0.10 EX31_RS11755 glyoxylate bypass operon transcriptional repressor IclR low > 89

Not shown: 32 genomes with orthologs for HP15_3376 only; 6 genomes with orthologs for HP15_34 only